Wei Song

A Characterization of the RNA Modification Response to Starvation under Low Temperatures in Large Yellow Croaker (Larimichthys crocea)

Qun Ji, Zhengli Xie, Li-Zhen Li, Xulei Han et autres

Emerging evidence shows that N6-methyladenosine (m6A) is a post-transcriptional RNA modification that plays a vital role in regulation of gene expression, fundamental biological processes, and physiological functions. To explore the effect of starvation on m6A methylation modification in the liver of Larimichthys …

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Ultrasound-Assisted Decalcification Process Optimizationof Carapace of Chinese Soft-shelled Turtle and Biochemical Characterization of Collagen

Qiongyu Zhao, Jian Hu, Caiyan Li, Shujie XU et autres

In order to determine the technological conditions for decalcification of the carapace from the Chinese soft-shelled turtle(Pelodiscus sinensis), the decalcification conditions were optimized under ultrasonic assisted treatment with hydrochloric acid as a decalcifying agent. The decalcification rate and collagen migration rate were …

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Identification and Characterization of PIWI-Interacting RNAs in Spinyhead Croakers (Collichthys lucidus) by Small RNA Sequencing

Qun Ji, Zhengli Xie, Wu Gan, Lumin Wang et autres

PIWI-interacting RNAs (piRNAs) are an emerging class of small RNAs which protect the animal germline genome against deleterious transposable elements. Nevertheless, the characteristics and sex-related expression patterns of piRNA in Collichthys lucidus remain unknown. In this study, we first performed systematic next-generation …

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Small RNA sequencing reveals sex-related miRNAs in Collichthys lucidus

Wei Song, Wu Gan, Zhengli Xie, Jia Chen et autres

Collichthys lucidus (C. lucidus) is an economically important fish species, exhibiting sexual dimorphism in its growth rate. However, there is a lack of research on its underlying sex-related mechanisms. Therefore, small RNA sequencing was performed to better comprehend these sex-related molecular mechanisms. …

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Additional file 3 of Transcriptome analysis of sweet potato responses to potassium deficiency

Fang Wang, Wenfang Tan, Wei Song, Songtao Yang et autres

Additional file 3: Supplement Table 7. Biological process of genes based on the gene ontology. Supplement Table 8. Cellular component of genes based on the gene ontology. Supplement Table 9. Molecular function of genes based on gene ontology.

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Additional file 4 of Transcriptome analysis of sweet potato responses to potassium deficiency

Fang Wang, Wenfang Tan, Wei Song, Songtao Yang et autres

Additional file 4: Supplement Table 10. The top 20 KEGG pathways of DEGs under low-K+ strss and high potassium condition.

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Inhibitory effects of lactobionic acid on Vibrio parahaemolyticus planktonic cells and biofilms

Qiuxia Fan, Yahong Yuan, Ting Zhang, Wei Song et autres

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Whole-Genome Sequencing and Genome-Wide Studies of Spiny Head Croaker (Collichthys lucidus) Reveals Potential Insights for Well-Developed Otoliths in the Family Sciaenidae

Wu Gan, Chenxi Zhao, Xinran Liu, Chao Bian et autres

Spiny head croaker (Collichthys lucidus), belonging to the family Sciaenidae, is a small economic fish with a main distribution in the coastal waters of Northwestern Pacific. Here, we constructed a nonredundant chromosome-level genome assembly of spiny head croaker and also made genome-wide …

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Hypoxic acclimation improves mitochondrial bioenergetic function in large yellow croaker Larimichthys crocea under Cu stress

Lin Zeng, Wencheng Li, Hui Zhang, Ping Cao et autres

The purpose of this study was to investigate how pre-hypoxia exposure affected the mitochondrial structure and bioenergetic function of large yellow croaker in responding to Cu stress. Fish were acclimated to normoxia and 3.0 mg DO L−1 for 48 h, then subjected …

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Analysis and evaluation of nutritional components of Collichthys lucidus muscles from Mindong waters

Ping Cao, Wei Song, Jia Chen, Keji JIANG et autres

Collichthys lucidus is an important small economic fish species in coastal areas of China. Because of fast growth, large catches and delicious taste, it is loved by people of Fujian and Zhejiang in China. At present, there are only a few studies …

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The First Genome Survey of the Antarctic Krill (Euphausia superba) Provides a Valuable Genetic Resource for Polar Biomedical Research

Yuting Huang, Chao Bian, Zhaoqun Liu, Lingling Wang et autres

The world-famous Antarctic krill (Euphausia superba) plays a fundamental role in the Antarctic food chain. It resides in cold environments with the most abundant biomass to support the Antarctic ecology and fisheries. Here, we performed the first genome survey of the Antarctic …

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De novo transcriptome assembly of four organs of Collichthys lucidus and identification of genes involved in sex determination and reproduction

Wei Song, Yi-Bing Zhang, Xiaojuan Zhang, Jian‐Fang Gui

The spinyhead croaker (Collichthys lucidus) is a commercially important fish species, which is mainly distributed in the coastal regions of China. However, little is known about the molecular regulatory mechanism underlying reproduction in C. lucidus. A de novo transcriptome assembly in brain, …

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