David Carrera

Dexter: A Performance-Cost Efficient Resource Allocation Manager for Serverless Data Analytics

Anna Maria Nestorov, Diego Marrón, Alberto Gutierrez-Torre, Chen Wang et autres

Leveraging serverless platforms for the efficient execution of distributed data analytics frameworks, such as Apache Spark [3], has gained substantial interest since early 2022. The elasticity, free-of-management, and on-demand scalability of serverless have motivated the effort in deploying distributed data analytics applications …

es, us (code pays fourni par la source)

Starfysh integrates spatial transcriptomic and histologic data to reveal heterogeneous tumor–immune hubs

Siyu He, Yinuo Jin, Achille Nazaret, Lingting Shi et autres

Spatially resolved gene expression profiling provides insight into tissue organization and cell-cell crosstalk; however, sequencing-based spatial transcriptomics (ST) lacks single-cell resolution. Current ST analysis methods require single-cell RNA sequencing data as a reference for rigorous interpretation of cell states, mostly do not …

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Standardization Initiatives and Market Approaches in Edge Federation

Monika Valdez, David Carrera, Angelos Antonopoulos

The introduction of the sixth generation (6G) mobile communications along with the establishment of Edge Computing and network virtualization motivate the concept of Telco Edge Platform (TEP), which is an effort towards exposing the mobile network capabilities to interested external third parties. …

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Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment

Siyu He, Yinuo Jin, Achille Nazaret, Lingting Shi et autres

Abstract Spatially-resolved gene expression profiling provides valuable insight into tissue organization and cell-cell crosstalk; however, spatial transcriptomics (ST) lacks single-cell resolution. Current ST analysis methods require single-cell RNA sequencing data as a reference for a rigorous interpretation of cell states and do …

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azizilab/starfysh: STARFYSH

Siyu He, Yinuo Jin, Achille Nazaret, Lingting Shi et autres

STARFYSH model v 1.0.0 : Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology

Floki

Anna Maria Nestorov, Josep Ll. Berral, Claudia Misale, Chen Wang et autres

Serverless computing emerges as an architecture choice to build and run containerized data-intensive pipelines. It leaves the tedious work of infrastructure management and operations to the cloud provider, allowing developers to focus on their core business logic, decomposing their jobs into small …

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Author Correction: Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

Gonzalo Gómez-Sánchez, Luisa Delgado-Serrano, David Carrera, David Torrents et autres

“We acknowledge the access to data from PCAWG Consortium which provided SVs data. We thank the patients and their families for their participation in the ICGC and TCGA projects. Among others, this study has been supported by projects: SAF2017-89450-R (TransTumVar) and PID2020-119797RB-100 …

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Towards automatic model specialization for edge video analytics

Daniel Rivas-Barragan, Francesc Guim, Jordà Polo, Pubudu M. Silva et autres

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Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

Gonzalo Gómez-Sánchez, Luisa Delgado-Serrano, David Carrera, David Torrents et autres

For many years, a major question in cancer genomics has been the identification of those variations that can have a functional role in cancer, and distinguish from the majority of genomic changes that have no functional consequences. This is particularly challenging when …

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Large-Scale Video Analytics Through Object-Level Consolidation

Daniel Rivas-Barragan, Francesc Guim, Jordà Polo, Josep Ll. Berral et autres

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Orchestration of Disaggregated Accelerators in Heterogeneous Resource Environments

Aaron Call, Josep Ll. Berral, David Carrera

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Large-Scale Video Analytics through Object-Level Consolidation

Daniel E. Rivas, Francesc Guim, Jordà Polo, David Carrera

As the number of installed cameras grows, so do the compute resources required to process and analyze all the images captured by these cameras. Video analytics enables new use cases, such as smart cities or autonomous driving. At the same time, it …