Nathalie Rivière

Rise of Neisseria gonorrhoeae with mosaic penA-34, France, 2018–2023

François Caméléna, Manel Mérimèche, Mary Mainardis, Aymeric Braille et autres

ABSTRACT Surveillance of antimicrobial resistance in Neisseria gonorrhoeae was conducted in France from 2018 to 2023. The proportion of isolates with cefixime MIC ≥ 0.032 mg/L increased from 8.1% in 2018–2022 to 23.5% in 2023. This sharp rise was driven by the …

fr, jp, ch, be, pt, cn, no (code pays fourni par la source)

SNP discovery by exome capture and resequencing in a pea genetic resource collection

Grégoire Aubert, Jonathan Kreplak, Magalie Leveugle, Hervé Duborjal et autres

Pea is a major pulse crop in temperate regions and a model plant in genetics. Large genetic marker resources are needed to assess the genetic diversity in the species genepool and to provide selection tools for breeders. In this study, we used …

fr (code pays fourni par la source)

SNP discovery by exome capture and resequencing in a pea genetic resource collection

Grégoire Aubert, Jonathan Kreplak, Magalie Leveugle, Hervé Duborjal et autres

Background & Summary In addition to being the model plant used by Mendel 1 to establish genetic laws, pea ( Pisum sativum L., 2n=14) is a major pulse crop cultivated in many temperate regions of the world. In order to face new …

fr (code pays fourni par la source)

Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Abstract Background Flax (Linum usitatissimum L.) has been cultivated for around 9,000 years and is therefore one of the oldest cultivated species. Today, flax is still grown for its oil (oil-flax or linseed cultivars) and its cellulose-rich fibres (fibre-flax cultivars) used for …

fr, ca, br (code pays fourni par la source)

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

fr (code pays fourni par la source)

Additional file 1 of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file 1: Analyses of differential gene expression between stem inner tissues and stem outer tissues sampled at vegetative and green capsule stages. Lists of differentially expressed genes and GO analyses (biological processes) for i) stem inner vegetative (SIV) vs stem outer …

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

fr (code pays fourni par la source)

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

fr (code pays fourni par la source)

Additional file 2 of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file 2: Analyses of differential gene expression (selected functional groups) between stem inner tissues and stem outer tissues sampled at vegetative and green capsule stages. Lists of differentially expressed genes (selected functional groups only) for i) stem inner vegetative (SIV) vs …

Additional file 3 of Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

Stéphane Fénart, Yves-Placide Assoumou Ndong, Jorge Duarte, Nathalie Rivière et autres

Additional file 3: Differentially expressed genes between Drakkar and Belinka flax cultivars. List of differentially expressed genes between Drakkar and Belinka flax cultivars. Values for up-regulated genes are represented in red and those for down-regulated genes in green colour. (XLS 121 KB)

High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array

Clément Mabire, Jorge Duarte, Aude Darracq, Ali Pirani et autres

BACKGROUND: Insertions/deletions (InDels) and more specifically presence/absence variations (PAVs) are pervasive in several species and have strong functional and phenotypic effect by removing or drastically modifying genes. Genotyping of such variants on large panels remains poorly addressed, while necessary for approaches such …

fr, us (code pays fourni par la source)

CNVMaize Indels Affymetrix Axiom Array

Stéphane Nicolas, Johann Joet, Jorge Duarte, Jean-Philippe Pichon et autres

These three datasets describe the content of Indel Affymetrix Axiom array corresponding to the publication "High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® Axiom® array " of Mabire, Duarte et al., 2019. The Affymetrix Axiom …

fr, il, gb (code pays fourni par la source)