Codebase for "Spatiotemporal lineage tracing reveals the dynamic spatial architecture of tumour growth and metastasis"

Le résumé fourni par la source

Code & scripts for reproducing spatial-lineage analyses in Jones, Sun et al, "Spatiotemporal lineage tracing reveals the dynamic spatial architecture of tumour growth and metastasis" 2026. Cassiopeia codebase used for processing lineage data and reconstructing trees. Code for reproducing all analyses in the study: ./utilities/: Utilities for handling spatial and phylogenetic data. ./reproducibility/: Notebooks to reproduce each figure panel. Each figure has it's own folder, and associated data and scripts are included. ./data/: General data for project. You may find the processed datasets on Zenodo (10.5281/zenodo.19771805).

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