Profil bibliographique

Thibaut Armel Chérif Gnimadi

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20Publications signalées

195Citations signalées

5Affiliations récentes

Institutions déclarées

Université Paris-Panthéon-Assas Conservatoire National des Arts et Métiers Gamal Abdel Nasser University of Conakry HESAM Université Institut de Recherche Agronomique de Guinée

Domaines associés

SARS-CoV-2 and COVID-19 ResearchSARS-CoV-2 detection and testingCOVID-19 epidemiological studiesvaccines and immunoinformatics approachesCOVID-19 Clinical Research Studies

Publications récentes

Accès ouvert 2026 software

MetaSTREAM: a Snakemake pipeline for resistome, mobilome and taxonomic profiling from Oxford Nanopore metagenomic sequencing

Thibaut Armel Chérif Gnimadi, Alpha Kabinet Kéita, Mano Joseph Mathew

0 citationsZenodo (CERN European Organization for Nuclear Research)

Accès ouvert 2026 software

MagSTREAM: a Snakemake pipeline for genome-resolved metagenomics, ARG-MGE co-localization, and antimicrobial resistance surveillance from Oxford Nanopore metagenomic assemblies

Thibaut Armel Chérif Gnimadi, Alpha Kabinet Kéita, Mano Joseph Mathew

0 citationsZenodo (CERN European Organization for Nuclear Research)

Accès ouvert 2026 software

MagSTREAM: a Snakemake pipeline for genome-resolved metagenomics, ARG-MGE co-localization, and antimicrobial resistance surveillance from Oxford Nanopore metagenomic assemblies

Thibaut Armel Chérif Gnimadi, Alpha Kabinet Kéita, Mano Joseph Mathew

0 citationsZenodo (CERN European Organization for Nuclear Research)

Accès ouvert 2026 preprint

Long-read metagenomics reveals a high burden of antimicrobial resistance, mobile genetic elements and bacterial diversity in hospital and community wastewater from Conakry, Guinea

Thibaut Armel Chérif Gnimadi, Alpha Kabiné Keita, Yaovi Mahuton Gildas Hounmanou, Kekeli Elodie Awounon et autres

0 citationsmedRxiv

Accès ouvert 2026 article

Post-pandemic SARS-CoV-2 seroprevalence and population immunity in Conakry, Guinea, 2024

Kadio Jean Jacques Olivier Kadio, Haby Diallo, Thibaut Armel Chérif Gnimadi, Abdoul Karim Soumah et autres

0 citationsBMC Public Health

Accès ouvert 2026 article

Genetic diversity and evolution of SARS-CoV-2 in the republic of Niger over 3 years

Adamou Lagaré, Issaka Aboubacar Adakal, Abdourahamane Yacouba, Thibaut Armel Chérif Gnimadi et autres

0 citationsInfection Genetics and Evolution

Accès ouvert 2026 article

Pan-continental spillover risk: integrated spatiotemporal, transmissibility and surveillance analysis of avian influenza a(H5N1) in Africa

Maladho Diaby, Alhassane Diallo, Castro G. Hounmenou, Salifou Talassone Bangoura et autres

1 citationFrontiers in Epidemiology

2026 preprint

The Evolutionary Dynamics and Regional Spread of Mpox in Africa: Insights from Multi-country Genomic Surveillance

Collins Kipngetich Tanui, Eddy Kinganda Lusamaki, Aine O'Toole, Moses Chitenje et autres

0 citationsmedRxiv

Accès ouvert 2026 article

Optimized Decolorization of Methylene Blue by Bacillus cereus: A Genomic and Analytical Approach

Fatima Hamadeh, Thibaut Armel Chérif Gnimadi, Mano Joseph Mathew, Charbel Al-Bayssari et autres

1 citationApplied Microbiology

Accès ouvert 2025 article

Prevalence and patterns of antibiotic prescriptions in Conakry hospitals, Guinea: a multicentre cross-sectional survey

Thibaut Armel Chérif Gnimadi, Kadio Jean-Jacques Olivier Kadio, Aïssata Camara, Castro Gbèmemali Hounmenou et autres

0 citationsJAC-Antimicrobial Resistance

Accès ouvert 2025 article

Assessing the long-term persistence of SARS-CoV-2 in Guinea: insights from post-epidemic sentinel syndromic surveillance data

Kadio Jean Jacques Olivier Kadio, Thibaut Armel Chérif Gnimadi, Emilande Guichet, Castro Gbèmemali Hounmenou et autres

4 citationsFrontiers in Epidemiology

Accès ouvert 2025 article

Re-emergence of Diphtheria in Guinea: An Outbreak Analysis of Vaccination and Disease Control Perspectives

Alpha Kabiné Keita, Abdoul Karim Soumah, Thibaut Armel Chérif Gnimadi, Abass Kande et autres

1 citationOpen Forum Infectious Diseases

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