Kai Waldrant

Longitudinal modality prediction learns gene regulatory patterns: insights from a single-cell competition

Christopher Lance, Vladimir A. Shitov, Hongzhi Wen, Yuge Ji et autres

Abstract Simultaneous measurement of chromatin, transcriptomic, and proteomic features in single cells opens new avenues for modeling interactions between molecular layers during dynamic biological processes. Predicting one modality from another - such as inferring gene expression from chromatin profiles or protein abundance …

de, us, ch, be (code pays fourni par la source)

Defining and benchmarking open problems in single-cell analysis

Malte D. Luecken, Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt et autres

de, us, be, se, gb, Afrique du Sud, ch, ae, it, ca (code pays fourni par la source)

Defining and benchmarking open problems in single-cell analysis

Malte D. Luecken, Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt et autres

de, au, us, ch, be, se, gb, Afrique du Sud, Nigéria, ca (code pays fourni par la source)

Viash: A meta-framework for building reusable workflow modules

Robrecht Cannoodt, Hendrik Cannoodt, Dries Schaumont, Kai Waldrant et autres

Most bioinformatics workflows consist of software components that are tightly coupled to the logic of the workflow itself.This limits reusability of the individual components in the workflow or introduces maintenance overhead when they need to be reimplemented in multiple workflows.We introduce Viash, …

us, gb (code pays fourni par la source)