Ruth A. Schmitz

Widespread BHET-hydrolyzing enzymes reveal a community-based pathway for PET transformation in the ocean

Ruth A. Schmitz, Katharina Saß, Johanna Hüttermann, Corbin Frohreich et autres

de (code pays fourni par la source)

Navigating prokaryotic viral genome analysis from metagenomic data

Almut Werner, Cynthia Maria Chibani, Ruth A. Schmitz

Viruses play crucial roles in microbial ecosystems, yet viromic analysis remains challenging due to the field's complexity and rapid evolution. This minireview supports non-specialists through the evolving landscape of viromics, focusing on the analysis of bacterial and archaeal DNA viruses from metagenomic …

H 2 ‐dependent modulation of tetrahydromethanopterin S‐methyltransferase (Mtr complex) activity by the small protein MtrR in Methanosarcina mazei

Tim Habenicht, Bjarne Hastedt, Liam Cassidy, Claudia Kießling et autres

Small open reading frame (sORF)‐encoded proteins, with less than 100 amino acids, have attracted increasing attention over the past decade after being overlooked due to limitations in classical methodologies. For the mesophilic archaeal model system Methanosarcina mazei , a high number of …

de, gb (code pays fourni par la source)

NOD-like receptor repertoire in the chromosome-level genome of the demosponge Dysidea avara (Schmidt, 1862)

Vasiliki Koutsouveli, Montserrat Torres-Oliva, Ángela M. Marulanda-Gómez, André Franke et autres

Porifera, one of the earliest diverging metazoans, have shown a surprisingly complex immune repertoire. However, most information to date is based on de novo transcriptome assemblies, limiting our knowledge regarding the presence and evolution of poriferan immune repertoire. Here, we generated the …

de, lk (code pays fourni par la source)

Small proteins in prokaryotes, a fascinating world

Wolfgang R. Hess, Kai Papenfort, Cynthia M. Sharma, Franz Narberhaus et autres

de (code pays fourni par la source)

Structure of the Methanosarcina mazei Mtr complex bound to the oxygen-stress responsive small protein MtrI

Tristan Reif-Trauttmansdorff, Eva Herdering, Stefan Bohn, Tomas C. Pascoa et autres

Methanogenic archaea emit ~1 Gt of methane annually, impacting global carbon cycling and climate. Central to their energy metabolism is a membrane-bound, sodium-translocating methyltransferase complex: the N⁵-tetrahydromethanopterin:CoM-S-methyltransferase (Mtr). It couples methyl transfer between two methanogen-specific cofactors with sodium ion transport across the …

de (code pays fourni par la source)

Exploring Bacteroidota strains from human stool and animal feces: phenotyping and functional diversity

Lisa Ladewig, Birhanu M. Kinfu, Hanna Fokt, H. Bethge et autres

Abstract Bacteroidota, a diverse phylum of bacteria, includes classes whose members are increasingly recognized for their significant contributions to host health, particularly through their antimicrobial properties. This study investigates the functional diversity of 42 new Bacteroidia and Sphingobacteriia strains enriched and identified …

de (code pays fourni par la source)

Small subunits MttS and MttQ of the MttP transporter regulate trimethylamine transport in Methanosarcina mazei

Tim Habenicht, Lisa Hellwig, Claudia Kießling, Felix J. Elling et autres

Abstract Small proteins (<100 aa) have moved in the focus of science after being overlooked for decades due to bioinformatical and biochemical challenges. While mass spectrometry-coupled ribosome profiling of the mesophilic methanoarchaeon Methanosarcina mazei has recently unveiled a wealth of novel small …

de (code pays fourni par la source)

Author response for "H2-dependent modulation of tetrahydromethanopterin S-methyltransferase (Mtr complex) activity by the small protein MtrR in Methanosarcina mazei"

Tim Habenicht, Bjarne Hastedt, Liam Cassidy, Claudia Kießling et autres

Author Correction: A roadmap for equitable reuse of public microbiome data

Laura A. Hug, Roland Hatzenpichler, Cristina Moraru, André Soares et autres

ca, us, de, Égypte, fr, Nigéria, ch, cl, at, ar, au, gb, dk, pt, cz, br, cn, es, nl, it, jp, lu, in, se (code pays fourni par la source)

Transcription profiling and functional analysis of spRNAs and their corresponding asRNAs in Methanosarcina mazei

Britta Jordan, Riddhi Gohil, Daniela Prasse, Lisa Hellwig et autres

Abstract Small proteins (sPs) encoded by small RNAs (sRNAs), the so-called small protein RNAs (spRNAs), and their corresponding antisense RNAs (asRNAs) have emerged as important regulatory elements in microbial stress adaptation, yet remain poorly characterized in archaea. In this study, we identified …

de (code pays fourni par la source)

A roadmap for equitable reuse of public microbiome data

Laura A. Hug, Roland Hatzenpichler, Cristina Moraru, André Soares et autres

Science benefits from rapid open data sharing, but current guidelines for data reuse were established two decades ago, when databases were several million times smaller than they are today. These guidelines are largely unfamiliar to the scientific community, and, owing to the …

ca, us, de, Égypte, fr, Nigéria, ch, cl, at, ar, au, gb, dk, pt, cz, br, cn, es, nl, it, jp, lu, in, se (code pays fourni par la source)