Natacha Roux

Molecular tools for the study of microbiomes associated with marine animal forests

Tallita Cruz Lopes Tavares, Maiara Queiroz Monteiro da Silva, Aschwin Hillebrand Engelen, Francesca Strano et autres

The central role played by microbes as driving forces of biogeochemical cycles, as well as the second genome of most organisms, has reinforced the necessity to study this unseen majority. Their relationships with Marine Animal Forests (MAFs) have been proven essential for …

From Genes to Pathways: A Curated Gene Approach to Accurate Pathway Reconstruction in Teleost Fish Transcriptomics

Marcela Herrera, Stefano Vianello, Laurie J. Mitchell, Zoé Chamot et autres

Interpreting the vast amounts of data generated by high-throughput sequencing technologies can often present a significant challenge, particularly for non-model organisms. While automated approaches like GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analyses are widely used, they …

jp, tw, pf, fr, us (code pays fourni par la source)

The multi-level effect of chlorpyrifos during clownfish metamorphosis

Mathieu Reynaud, Stefano Vianello, Shu‐Hua Lee, Pauline Salis et autres

Chemical pollution in coastal waters, particularly from agricultural runoff organophosphates, poses a significant threat to marine ecosystems, including coral reefs. Pollutants such as chlorpyrifos (CPF) are widely used in agriculture and have adverse effects on marine life and humans. In this paper, …

fr, jp, pf, tw, be (code pays fourni par la source)

Highlighting competitive interactions between algae, corals, and herbivores in Bora Bora (French Polynesia)

Camille Carpentier, Frédéric Bertucci, L. Sowinski, E. Gairin et autres

pf, fr, jp, be (code pays fourni par la source)

Anemonefish use sialic acid metabolism as Trojan horse to avoid giant sea anemone stinging

Natacha Roux, Clément Philippe Delannoy, Shin‐Yi Yu, Saori Miura et autres

BACKGROUND: Anemonefish association with sea anemones is a prime example of mutualistic symbiosis. These fish live inside the sea anemone, benefitting from the protection of its toxic nematocysts, and in return, protect the anemone from its own predators. How anemonefish manage to …

jp, fr, tw (code pays fourni par la source)

Temporal shifts in algal and fish assemblages following the introduction of herbivorous species in coral reef patches (Bora Bora Island)

Xavier Raick, Ethel Mery, Camille Carpentier, Stéphanie Krimou et autres

be, fr, pf (code pays fourni par la source)

From Genes to Pathways: A Curated Gene Approach to Accurate Pathway Reconstruction in Teleost Fish Transcriptomics

Marcela Herrera, Stefano Vianello, Laurie J. Mitchell, Zoé Chamot et autres

Abstract Interpreting the vast amounts of data generated by high-throughput sequencing technologies can often present a significant challenge, particularly for non-model organism. While automated approaches like GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analyses are widely used, …

jp, tw, pf, fr, us (code pays fourni par la source)

Author response: The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (Epinephelus malabaricus)

Roger Huerlimann, Natacha Roux, Ken Maeda, Polina Pilieva et autres

Transcriptomic analyses of Malabar grouper show pathways known to be involved in metamorphosis are also upregulated at an early stage of larval development, suggesting an additional function during early development.

jp, pf (code pays fourni par la source)

The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (Epinephelus malabaricus)

Roger Huerlimann, Natacha Roux, Ken Maeda, Polina Pilieva et autres

Most teleost fishes exhibit a biphasic life history with a larval oceanic phase that is transformed into morphologically and physiologically different demersal, benthic, or pelagic juveniles. This process of transformation is characterized by a myriad of hormone-induced changes, during the often abrupt …

jp, au, tw (code pays fourni par la source)

The multi-level effect of chlorpyrifos during clownfish metamorphosis

Mathieu Reynaud, Stefano Vianello, Shu‐Hua Lee, Pauline Salis et autres

Abstract Chemical pollution in coastal waters, particularly from agricultural runoff organophosphates, poses a significant threat to marine ecosystems, including coral reefs. Pollutants such as chlorpyrifos (CPF) are widely used in agriculture and have adverse effects on marine life and humans. In this …

fr, jp, pf, tw, be (code pays fourni par la source)

The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (Epinephelus malabaricus)

Roger Huerlimann, Natacha Roux, Ken Maeda, Polina Pilieva et autres

Abstract Most teleost fishes exhibit a biphasic life history with a larval oceanic phase that is transformed into morphologically and physiologically different demersal, benthic or pelagic juveniles. This process of transformation is characterized by a myriad of hormone induced changes, during the …

jp, au, tw (code pays fourni par la source)

Author response: The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (Epinephelus malabaricus)

Roger Huerlimann, Natacha Roux, Ken Maeda, Polina Pilieva et autres

Most teleost fishes exhibit a biphasic life history with a larval oceanic phase that is transformed into morphologically and physiologically different demersal, benthic or pelagic juveniles. This process of transformation is characterized by a myriad of hormone induced changes, during the often …

jp, au (code pays fourni par la source)