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Profil bibliographique

Chitrita Goswami

Informations fournies par OpenAlex. Research Africa ne déduit ni nationalité, ni poste, ni coordonnées personnelles.

15Publications signalées
68Citations signalées
0Affiliations récentes

Les domaines associés

Cancer Genomics and DiagnosticsSingle-cell and spatial transcriptomicsFerroptosis and cancer prognosisGene expression and cancer classificationHandwritten Text Recognition Techniques

Les publications récentes

Accès ouvert 2025 article OpenAlex

Artificial intelligence driven tumor risk stratification from single-cell transcriptomics using phenotype algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent of …

in, au, gb, us, it, fr, ca (code pays fourni par la source)

2 citations eLife
Accès ouvert 2025 peer-review OpenAlex

Author response: SCellBOW: AI-Driven Tumor Risk Stratification from Single-Cell Transcriptomics Using Phenotype Algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent of …

au, gb, in, us, it, fr (code pays fourni par la source)

0 citations
Accès ouvert 2025 preprint OpenAlex

SCellBOW: AI-Driven Tumor Risk Stratification from Single-Cell Transcriptomics Using Phenotype Algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Abstract Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent …

in, au, gb, us, it, fr, ca (code pays fourni par la source)

1 citation eLife
Accès ouvert 2024 peer-review OpenAlex

Author response: Pseudo-grading of tumor subpopulations from single-cell transcriptomic data using Phenotype Algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent of …

au, gb, in, us, it, fr (code pays fourni par la source)

0 citations
Accès ouvert 2024 preprint OpenAlex

Pseudo-grading of tumor subpopulations from single-cell transcriptomic data using Phenotype Algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Abstract Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent …

in, au, gb, us, it, fr, ca (code pays fourni par la source)

1 citation eLife
Accès ouvert 2024 preprint OpenAlex

Artificial intelligence driven tumor risk stratification from single-cell transcriptomics using phenotype algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent of …

in, au, gb, us, it, fr, ca (code pays fourni par la source)

2 citations eLife
Accès ouvert 2023 preprint OpenAlex

InGene: Finding influential genes from embeddings of nonlinear dimension reduction techniques

Chitrita Goswami, N Bhattacharya, Debarka Sengupta

Abstract We introduce InGene , the first of its kind, fast and scalable non-linear, unsupervised method for analyzing single-cell RNA sequencing data (scRNA-seq). While non-linear dimensionality reduction techniques such as t-SNE and UMAP are effective at visualizing cellular sub-populations in low-dimensional space, …

in, us, gb, au (code pays fourni par la source)

0 citations bioRxiv (Cold Spring Harbor Laboratory)
Accès ouvert 2022 preprint OpenAlex

SCellBOW: AI-Driven Tumor Risk Stratification from Single-Cell Transcriptomics Using Phenotype Algebra

N Bhattacharya, Anja Rockstroh, Sanket Suhas Deshpande, Sam Koshy Thomas et autres

ABSTRACT Single-cell RNA-sequencing (scRNA-seq) coupled with robust computational analysis facilitates the characterization of phenotypic heterogeneity within tumors. Current scRNA-seq analysis pipelines are capable of identifying a myriad of malignant and non-malignant cell subtypes from single-cell profiling of tumors. However, given the extent …

in, au, gb, us, it, fr, ca (code pays fourni par la source)

0 citations bioRxiv (Cold Spring Harbor Laboratory)
Accès ouvert 2020 article OpenAlex

Molecular signature comprising 11 platelet-genes enables accurate blood-based diagnosis of NSCLC

Chitrita Goswami, Smriti Chawla, Deepshi Thakral, Himanshu Pant et autres

BACKGROUND: Early diagnosis is crucial for effective medical management of cancer patients. Tissue biopsy has been widely used for cancer diagnosis, but its invasive nature limits its application, especially when repeated biopsies are needed. Over the past few years, genomic explorations have …

in, au (code pays fourni par la source)

22 citations BMC Genomics

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