Umar Faruq Chowdhury

Muscle proteome profile and potential allergens of premature hilsa shad (Tenualosa ilisha)

Nazma Shaheen, Fares Z. Najar, Umar Faruq Chowdhury, Md. Arko Ayon Chowdhury et autres

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A multi-epitope based vaccine against the surface proteins expressed in cyst and trophozoite stages of parasite Entamoeba histolytica

Dipankor Chatterjee, Razoan Al Rimon, Umar Faruq Chowdhury, Mohammad Riazul Islam

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Plant growth promoting endophyte Burkholderia contaminans NZ antagonizes phytopathogen Macrophomina phaseolina through melanin synthesis and pyrrolnitrin inhibition

Nazia Zaman, Umar Faruq Chowdhury, Rifath Nehleen Reza, Farhana Tasnim Chowdhury et autres

The endophytic bacterium Burkholderia contaminans NZ was isolated from jute, which is an important fiber-producing plant. This bacterium exhibits significant growth promotion activity in in vivo pot experiments, and like other plant growth-promoting (PGP) bacteria fixes nitrogen, produces indole acetic acid (IAA), …

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Subtractive proteomics approach to Unravel the druggable proteins of the emerging pathogen Waddlia chondrophila and drug repositioning on its MurB protein

Umar Faruq Chowdhury, Abdullah Al Saba, Abu Sufian Sufi, Akib Mahmud Khan et autres

Waddlia chondrophila is an emerging pathogen that has been implicated in numerous unpropitious pregnancy events in humans and ruminants. Taking into account its association with abortigenic events, possible modes of transmission, and future risk, immediate clinical measures are required to prevent widespread …

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In-silico predictions of deleterious SNPs in Human ephrin type-A receptor 3 (EPHA3) gene

Dipankor Chatterjee, Umar Faruq Chowdhury, Mohammad Umer Sharif Shohan, Md Mohasin et autres

Abstract Ephrin type-A receptor 3 (EPHA3) is a receptor tyrosine kinase encoded by the EPHA3 gene, involves in many biological functions, such as cell migration, adhesion, etc. Overexpression or inactivation of EPHA3 receptors can be complicit in various oncogenic events. Therefore, SNP …

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In-silico predictions of deleterious SNPs in human ephrin type-A receptor 3 (EPHA3) gene

Dipankor Chatterjee, Umar Faruq Chowdhury, Mohammad Umer Sharif Shohan, Md Mohasin et autres

Ephrin type-A receptor 3 (EPHA3) is a receptor tyrosine kinase involved in many biological functions, including migration, adhesion, and so on. Dysregulation of the EPHA3 receptor gene can lead to various oncogenic events, such as prostate cancer and hepatocellular carcinoma. Therefore, in …

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A computational approach to design potential siRNA molecules as a prospective tool for silencing nucleocapsid phosphoprotein and surface glycoprotein gene of SARS-CoV-2

Umar Faruq Chowdhury, Mohammad Umer Sharif Shohan, Kazi Injamamul Hoque, Mirza Ashikul Beg et autres

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On the reappearance of the Indian grey wolf in Bangladesh after 70 years: what do we know?

Muntasir Akash, Umar Faruq Chowdhury, Fatema-Tuz-Zohora Khaleque, Rifath Nehleen Reza et autres

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Short k-mer abundance profiles yield robust machine learning features and accurate classifiers for RNA viruses

Md Nafis Ul Alam, Umar Faruq Chowdhury

High-throughput sequencing technologies have greatly enabled the study of genomics, transcriptomics and metagenomics. Automated annotation and classification of the vast amounts of generated sequence data has become paramount for facilitating biological sciences. Genomes of viruses can be radically different from all life, …

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Short k-mer Abundance Profiles Yield Robust Machine Learning Features and Accurate Classifiers for RNA Viruses

Md Nafis Ul Alam, Umar Faruq Chowdhury

Abstract High throughout sequencing technologies have greatly enabled the study of genomics, transcriptomics and metagenomics. Automated annotation and classification of the vast amounts of generated sequence data has become paramount for facilitating biological sciences. Genomes of viruses can be radically different from …

bd (code pays fourni par la source)

A Computational Approach to Design Potential siRNA Molecules as a Prospective Tool for Silencing Nucleocapsid Phosphoprotein and Surface Glycoprotein Gene of SARS-CoV-2

Umar Faruq Chowdhury, Mohammad Umer Sharif Shohan, Kazi Injamamul Hoque, Mirza Ashikul Beg et autres

ABSTRACT An outbreak, caused by a RNA virus, SARS-CoV-2 named COVID-19 has become pandemic with a magnitude which is daunting to all public health institutions in the absence of specific antiviral treatment. Surface glycoprotein and nucleocapsid phosphoprotein are two important proteins of …

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