Sílvia Bofill-Mas

Novel Field-to-Lab Passive Sampling Enables Drinking Water Viral Surveillance in Remote and Low-Resource Settings Without Cold Chain

Ignasi Estarlich-Landajo, Aakanksha Pathania, Marta Rusiñol, Sally Weston et autres

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Catalan Surveillance Network of SARS-CoV-2 in Sewage

Lluís Corominas, Neus Collado, Laura Guerrero‐Latorre, Nerea Abasolo-Zabalo et autres

The Catalan Surveillance Network of SARS-CoV-2 in Sewage started in July 2020 to monitor 56 wastewater treatment plants (WWTPs) all over the country representing the sewage from the 80% of the total population. The sampling plan consist in a weekly collection of …

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Exploring the Use of Passive Samplers for the Surveillance of Avian Influenza Viruses in Wetlands: A Laboratory and Field Validation Study

Valentina Panzarin, Marika Crimaudo, Francesco Bonfante, Sabrina Marciano et autres

Surveillance in wild birds is essential for the timely detection of high pathogenicity avian influenza (HPAI) strains. As flocks congregate in large numbers in wetlands and may potentially contaminate the environment with pathogens, the monitoring of such water bodies represents an attractive …

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Livestock aggregated samples for monitoring viruses infecting animals and potentially zoonotic viral pathogens

Marta Rusiñol, Sandra Martínez‐Puchol, Diana Ribeiro, Ona Torrejón et autres

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Exploring waterborne viruses in groundwater: Quantification and Virome characterization via passive sampling and targeted enrichment sequencing

Cristina Mejías-Molina, Ignasi Estarlich-Landajo, Sandra Martínez‐Puchol, Sílvia Bofill-Mas et autres

Aquifers, which provide drinking water for nearly half the world's population, face significant challenges from microbial contamination, particularly from waterborne viruses such as human adenovirus (HAdV), norovirus (NoV) and enterovirus (EV). This study, conducted as part of the UPWATER project, investigates the …

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Exploring viral contamination in urban groundwater and runoff

Marta Itarte, Eva Forés, Sandra Martínez‐Puchol, Laura Scheiber et autres

The reliance of the global population on urban aquifers is steadily increasing, and urban aquifers are susceptible to pathogenic contamination through sources such as sewer leakage or urban runoff. However, there is insufficient monitoring of groundwater quality in urban areas. In this …

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Assessing environmental exposure to viruses in wastewater treatment plant and swine farm scenarios with next-generation sequencing and occupational risk approaches

Marta Itarte, Miquel Calvo, Lola Martínez-Frago, Cristina Mejías-Molina et autres

Occupational exposure to pathogens can pose health risks. This study investigates the viral exposure of workers in a wastewater treatment plant (WWTP) and a swine farm by analyzing aerosol and surfaces samples. Viral contamination was evaluated using quantitative polymerase chain reaction (qPCR) …

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Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals

Cristina Mejías-Molina, Anna Pico-Tomàs, Sandra Martínez‐Puchol, Marta Itarte et autres

BACKGROUND: Human viruses released into the environment can be detected and characterized in wastewater. The study of wastewater virome offers a consolidated perspective on the circulation of viruses within a population. Because the occurrence and severity of viral infections can vary across …

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Exploring Viral Contamination in Urban Groundwater and Runoff

Marta Itarte, Eva Forés, Sandra Martínez‐Puchol, Laura Scheiber et autres

Target enrichment sequencing of urban groundwater and runoff samples.

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Exploring Viral Contamination in Urban Groundwater and Runoff

Marta Itarte, Eva Forés, Sandra Martínez‐Puchol, Laura Scheiber et autres

Target enrichment sequencing of urban groundwater and runoff samples.

es (code pays fourni par la source)

CAPTVRED: an automated pipeline for viral tracking and discovery from capture-based metagenomics samples

Maria Tarradas-Alemany, Sandra Martínez‐Puchol, Cristina Mejías-Molina, Marta Itarte et autres

Abstract Summary Target Enrichment Sequencing or Capture-based metagenomics has emerged as an approach of interest for viral metagenomics in complex samples. However, these datasets are usually analyzed with standard downstream Bioinformatics analyses. CAPTVRED (Capture-based metagenomics Analysis Pipeline for tracking ViRal species from …

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Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals (I)

Cristina Mejías-Molina, Anna Pico-Tomàs, Sandra Martínez‐Puchol, Marta Itarte et autres

Metagenomic analysis of viruses in wastewater from sewers representing different age group populations

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