Galaxy2Shiny2Galaxy

Le résumé fourni par la source

For our NGS analysis, we have combined Galaxy with Shiny. Each time a data set (e. g.: a count table from an RNA-Seq experiment) is created in Galaxy, a new app is set up on a local Shiny server. The Galaxy user can then decide to look at the data in a interactive manner and generate a variety of different plots (e. g.: heat map, correlation plot, scatter plot, MDS plot...) or select data points of interest. If the Galaxy user wants to store a particular plot or the selected data points, the Shiny server has enough privileges to store the visualizations or table back into the original Galaxy history with the help of the Galaxy API. At the same time, each step is tracked in a log file on the Shiny server. code: https://github.com/hrhotz/galaxy2shiny2galaxy

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.