Accès ouvert déclaré
2020
preprint
The Trans-Ancestral Genomic Architecture of Glycaemic Traits
Ji Chen, Cassandra N. Spracklen, Gaëlle Marenne, Arushi Varshney, Laura J. Corbin, Jian’an Luan, Sara M. Willems, Ying Wu, Xiaoshuai Zhang, Momoko Horikoshi, Thibaud Boutin, Reedik Mägi, Johannes Waage, Achilleas Pitsilides, Ruifang Li‐Gao, Kei Hang, Jie Yao, Mila Desi Anasanti, Audrey Y. Chu, Annique Claringbould, Jani Heikkinen, Jaeyoung Hong, Jouke‐Jan Hottenga, Shaofeng Huo, Marika Kaakinen, Tin Louie, Winfried März, Hortensia Moreno-Macías, Anne Ndungu, Sarah C. Nelson, Ilja M. Nolte, Kari E. North, Chelsea K. Raulerson, Debashree Ray, Rebecca Rohde, Denis Rybin, Claudia Schurmann, Xueling Sim, Loz Southam, Isobel D. Stewart, Carol A. Wang, Yujie Wang, Peitao Wu, Weihua Zhang, Tarunveer S. Ahluwalia, Emil VR Appel, Lawrence F. Bielak, Jennifer A. Brody, Noël P. Burtt, Claudia Cabrera, Brian E. Cade, Jin Fang Chai, Xiaoran Chai, Li-Ching Chang, Chien-Hsiun Chen, Brian H. Chen, Kumaraswamy Naidu Chitrala, Yen‐Feng Chiu, Hugoline G. de Haan, Graciela E. Delgado, Ayşe Demirkan, Qing Duan, Jorgen Engmann, Segun Fatumo, Javier Gayán, Franco Giulianini, Jung Ho Gong, Stefan Gustafsson, Yang Hai, Fernando Pires Hartwig, Jing He, Yoriko Heianza, Tao Huang, Alicia Huerta‐Chagoya, Mi Yeong Hwang, Richard A. Jensen, Takahisa Kawaguchi, Katherine A. Kentistou, Young Jin Kim, Marcus E. Kleber, Ishminder K. Kooner, Shuiqing Lai, Leslie A. Lange, Carl D. Langefeld, Marie Lauzon, Man Li, Symen Ligthart, Jun Liu, Marie Loh, Jirong Long, Valeriya Lyssenko, Massimo Mangino, Carola Marzi, May E. Montasser, Abhishek Nag, Masahiro Nakatochi, Damia Noce, Raymond Noordam, Giorgio Pistis, Michael Preuß, Laura M. Raffield, Laura J. Rasmussen‐Torvik, Stephen S. Rich, Neil R. Robertson, Rico Rueedi, Kathleen A. Ryan, Serena Sanna, Richa Saxena, Katharina E. Schraut, Bengt Sennblad, Kazuya Setoh, Albert V. Smith, Lorraine Southam, Thomas Sparsø, Rona J. Strawbridge, Fumihiko Takeuchi, Jingyi Tan, Stella Trompet, Erik B. van den Akker, Peter J. van der Most, Niek Verweij, Mandy Vogel, Heming Wang, Chaolong Wang, Nan Wang, Helen R. Warren, Wanqing Wen, Tom Wilsgaard, Andrew Wong, Andrew R. Wood, Tian Xie, Mohammad Hadi Zafarmand, Jinghua Zhao, Wei Zhao, Najaf Amin, Zorayr Arzumanyan, Arne Astrup, Stephan J. L. Bakker, Damiano Baldassarre, Marian Beekman, Richard N. Bergman, Alain G. Bertoni, Matthias Blüher, Lori L. Bonnycastle, Stefan R. Bornstein, Donald W. Bowden, Qiuyin Cai, Archie Campbell, Harry Campbell, Yi‐Cheng Chang, Eco J. C. de Geus, Abbas Dehghan, Shufa Du, Guðný Eiríksdóttir, Aliki Eleni Farmaki, Mattias Frånberg, Christian Fuchsberger, Yu‐Tang Gao, Anette P. Gjesing, Anuj Goel, Sohee Han, Catharina A. Hartman, Christian Herder, Andrew A. Hicks, Chang‐Hsun Hsieh, Willa A. Hsueh, Sahoko Ichihara, Michiya Igase, M. Arfan Ikram, W. Craig Johnson, Marit E. Jørgensen, Peter K. Joshi, Rita R. Kalyani, Fouad Kandeel, Tomohiro Katsuya, Chiea Chuen Khor, Wieland Kieß, Ivana Kolčić, Teemu Kuulasmaa, Johanna Kuusisto, Kristi Läll, Kelvin Lam, Sang Lee, Rozenn N. Lemaître, Honglan Li, Lifelines Cohort Study, Shih-Yi Lin, Jaana Lindström, Allan Linneberg, Jianjun Liu, Carlos Lorenzo, Tatsuaki Matsubara, Fumihiko Matsuda, Geltrude Mingrone, Simon P. Mooijaart, Sanghoon Moon, Toru Nabika, Girish N. Nadkarni, Jerry L. Nadler, Mari Nelis, Matthew Neville, Jill M. Norris, Yasumasa Ohyagi, Annette Peters, Patricia A. Peyser, Ozren Polašek, Qibin Qi, Dennis Raven, Dermot F. Reilly, Alex P. Reiner, Fernando Rivideneira, Kathryn Roll, Igor Rudan, Charumathi Sabanayagam, Kevin Sandow, Naveed Sattar, Annette Schürmann, Jinxiu Shi, Heather M. Stringham, Kent D. Taylor, Tanya M. Teslovich, Betina H. Thuesen, Paul R. H. J. Timmers, Elena Tremoli, Michael Y. Tsai, André G. Uitterlinden, Rob M. van Dam, Astrid van Hylckama Vlieg, Jana V. van Vliet‐Ostaptchouk, Jagadish Vangipurapu, Henrik Vestergaard, Tao Wang, Ko Willems van Dijk, Yong‐Bing Xiang, Tatijana Zemunik, Gonçalo R. Abecasis, Linda S. Adair, Carlos A. Aguilar‐Salinas, Marta E. Alarcón‐Riquelme, Ping An, Larissa Avilés‐Santa, Diane M. Becker, Lawrence J. Beilin, Sven Bergmann, Hans Bisgaard, Corri Black, Michael Boehnke, Eric Boerwinkle, Bernhard Böhm, Klaus Bønnelykke, Dorret I. Boomsma, Erwin P. Böttinger, Thomas A. Buchanan, Mickaël Canouil, Mark J. Caulfield, John C. Chambers, Daniel I. Chasman, Yii‐Der Ida Chen, Ching‐Yu Cheng, Francis S. Collins, Adolfo Correa, Francesco Cucca, H. Janaka de Silva, George Dedoussis, Sölve Elmståhl, Michele K. Evans, Ele Ferranni, Luigi Ferruci, José C. Florez, Paul W. Franks, Timothy M. Frayling, Philippe Froguel, Bruna Gigante, Mark O. Goodarzi, Penny Gordon‐Larsen, Harald Grallert, Niels Grarup, Sameline Grimsgaard, Leif Groop, Vilmundur Guðnason, Xiuqing Guo, Anders Hamsten, Torben Hansen, Caroline Hayward, Susan R. Heckbert, Bernardo Lessa Horta, Wei Huang, Erik Ingelsson, James S. Pankow, Jost B. Jonas, J. Wouter Jukema, Pontiano Kaleebu, Robert C. Kaplan, Sharon L. R. Kardia, Norihiro Kato, Sirkka Keinänen‐Kiukaanniemi, Bong-Jo Kim, Mika Kivimäki, Heikki A. Koistinen, Jaspal S. Kooner, Antje Körner, Péter Kovács, Diana Kuh, Meena Kumari, Zoltán Kutalik, Markku Laakso, Timo A. Lakka, Lenore J. Launer, Karin Leander, Huaixing Li, Lin Xu, Lars Lind, Cecilia M. Lindgren, Simin Liu, Ruth J. F. Loos, Patrik K. E. Magnusson, Anubha Mahajan, Andres Metspalu, Dennis O. Mook‐Kanamori, Trevor A. Mori, Patricia B. Munroe, Inger Njølstad, Jeffrey R. O’Connell, Albertine J. Oldehinkel, Ken K. Ong, Sandosh Padmanabhan, Oluf Pedersen, Craig E. Pennell, David J. Porteous, Peter P. Pramstaller, Michael A. Province, Bruce M. Psaty, Lu Qi, Leslie J. Raffel, Rainer Rauramaa, Susan Redline, Paul M. Ridker, Frits R. Rosendaal, Timo Saaristo, Manjinder S. Sandhu, Jouko Saramies, Neil Schneiderman, Peter E. H. Schwarz, Laura J. Scott, Elizabeth Selvin, Peter Sever, Xiao‐Ou Shu, P. Eline Slagboom, Kerrin S. Small, Blair H. Smith, Harold Snieder, Tamar Sofer, Thorkild I. A. Sørensen, Tim D. Spector, Alice Stanton, Claire J. Steves, Michael Stümvoll, Liang Sun, Yasuharu Tabara, E Shyong Tai, Nicholas J. Timpson, Anke Tönjes, Jaakko Tuomilehto, Teresa Tusié, Matti Uusitupa, Pim van der Harst, Cornelia M. van Duijn, Véronique Vitart, Péter Vollenweider, Tanja G. M. Vrijkotte, Lynne E. Wagenknecht, Mark Walker, Ya X. Wang, Richard M. Watanabe, Hugh Watkins, Wen Bin Wei, Ananda R. Wickremasinghe, Gonneke Willemsen, James F. Wilson, Tien Yin Wong, Jer‐Yuarn Wu, Anny H. Xiang, Lisa R. Yanek, Loïc Yengo, Mitsuhiro Yokota, Eleftheria Zeggini, Wei Zheng, Alan B. Zonderman, Jerome I. Rotter, Anna L. Gloyn, Mark I. McCarthy, Josée Dupuis, James B. Meigs, Robert A. Scott, Inga Prokopenko, Aaron Leong, Ching‐Ti Liu, Stephen C.J. Parker, Karen L. Mohlke, Claudia Langenberg, Eleanor Wheeler, Andrew P. Morris, Inês Barroso
10Citations signalées — pas une note de qualité
234Institutions déclarées
35Pays d’affiliation déclarés
Résumé fourni par la source
Abstract Glycaemic traits are used to diagnose and monitor type 2 diabetes, and cardiometabolic health. To date, most genetic studies of glycaemic traits have focused on individuals of European ancestry. Here, we aggregated genome-wide association studies in up to 281,416 individuals without diabetes (30% non-European ancestry) with fasting glucose, 2h-glucose post-challenge, glycated haemoglobin, and fasting insulin data. Trans-ancestry and single-ancestry meta-analyses identified 242 loci (99 novel; P <5×10 -8 ), 80% with no significant evidence of between-ancestry heterogeneity. Analyses restricted to European ancestry individuals with equivalent sample size would have led to 24 fewer new loci. Compared to single-ancestry, equivalent sized trans-ancestry fine-mapping reduced the number of estimated variants in 99% credible sets by a median of 37.5%. Genomic feature, gene-expression and gene-set analyses revealed distinct biological signatures for each trait, highlighting different underlying biological pathways. Our results increase understanding of diabetes pathophysiology by use of trans-ancestry studies for improved power and resolution.
Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.
Contrôle bibliographique ouvert
DOI retrouvé dans Crossref DOI retrouvé ; titre concordant.
- Titre Crossref
- The Trans-Ancestral Genomic Architecture of Glycaemic Traits
- Date Crossref
- 25/07/2020
- Éditeur
- openRxiv
- Type
- posted-content
Ce recoupement confirme des métadonnées liées au DOI. Il ne confirme ni la méthode ni les conclusions de l’étude et ne compte pas comme une seconde source scientifique indépendante.
Institutions déclarées
University of ExeterWellcome Sanger InstituteUniversity of North Carolina at Chapel HillUniversity of Massachusetts AmherstInsermUniversité de Bretagne OccidentaleÉcole nationale d'ingénieurs de BrestUniversity of MichiganUniversity of BristolUniversity of CambridgeMRC Epidemiology UnitShandong UniversityCentre for Human GeneticsUniversity of OxfordOxford Centre for Diabetes, Endocrinology and MetabolismRIKEN Center for Integrative Medical SciencesInstitute of Genetics and CancerMRC Human Genetics UnitMedical Research CouncilUniversity of TartuUniversity of CopenhagenSteno Diabetes CentersGentofte HospitalCopenhagen Prospective Studies on Asthma in ChildhoodBoston UniversityLeiden University Medical CenterCity University of Hong KongBrown UniversityUCLA Medical CenterHarbor–UCLA Medical CenterImperial College LondonBrigham and Women's HospitalUniversity Medical Center GroningenUniversity of GroningenAmsterdam University Medical CentersVrije Universiteit AmsterdamShanghai Institute of Nutrition and HealthUniversity of Chinese Academy of SciencesUniversity of SurreyUniversity of WashingtonMedical University of GrazHeidelberg UniversityUniversity Hospital HeidelbergSynlab (Germany)University Medical Centre MannheimUniversidad Autónoma MetropolitanaJohns Hopkins UniversityHasso Plattner InstituteIcahn School of Medicine at Mount SinaiNational University of SingaporeNational University Health SystemUniversity of Newcastle AustraliaEaling HospitalLondon North West Healthcare NHS TrustNovo Nordisk FoundationBroad InstituteQueen Mary University of LondonWilliam Harvey Research InstituteHarvard UniversityCircadian (United States)Singapore National Eye CenterSingapore Eye Research InstituteInstitute of Biomedical Sciences, Academia SinicaNational Institutes of HealthNational Institute on AgingNational Health Research InstitutesErasmus MCUniversity College LondonLondon School of Hygiene & Tropical MedicineAfrican Field Epidemiology NetworkUganda Virus Research InstituteUppsala UniversityScience for Life LaboratoryUniversity of AucklandUniversidade Federal de PelotasVanderbilt University Medical CenterTulane UniversityPeking UniversityNational Institute of Genomic MedicineSecretaría de Ciencia, Humanidades, Tecnología e InnovaciónKorea National Institute of HealthKyoto UniversityCentre for Global Health ResearchUniversity of EdinburghUniversity of Colorado AnschutzWake Forest UniversityUniversity of UtahNanyang Technological UniversityLund UniversityUniversity of BergenKing's College LondonGuy's and St Thomas' NHS Foundation TrustHelmholtz MunichDeutsches Diabetes-Zentrum e.V.German Center for Diabetes ResearchHeinrich Heine University DüsseldorfUniversity of Maryland, BaltimoreNagoya UniversityEurac ResearchInstitute for BiomedicineInstitute of Genetic and Biomedical ResearchChild Health and Development InstituteNorthwestern UniversityUniversity of VirginiaSIB Swiss Institute of BioinformaticsUniversity of LausanneMassachusetts General HospitalIcelandic Heart AssociationKarolinska InstitutetUniversity of GlasgowNational Center for Global Health and MedicineDelft University of TechnologyGenomics (United Kingdom)University Hospital LeipzigLeipzig UniversityAgency for Science, Technology and ResearchHuazhong University of Science and TechnologyGenome Institute of SingaporeKeck Hospital of USCUiT The Arctic University of NorwayMRC Unit for Lifelong Health and AgeingGGD AmsterdamUniversity of AmsterdamUniversity of MilanCentro Cardiologico MonzinoUniversity of Southern CaliforniaNational Human Genome Research InstituteUniversity Hospital Carl Gustav CarusTechnische Universität DresdenWestern General HospitalNational Taiwan UniversityNational Taiwan University HospitalHarokopio University of AthensShanghai Cancer InstituteTri-Service General HospitalNational Defense Medical CenterThe Ohio State University Wexner Medical CenterJichi Medical UniversityEhime UniversityUniversity of Southern DenmarkJohns Hopkins MedicineCity of HopeBeckman Research InstituteThe University of OsakaUniversity of SplitUniversity of Eastern FinlandKuopio University HospitalFoundation UniversityUniversity of San CarlosRenji HospitalState Key Laboratory of Oncogene and Related GenesNational Yang Ming Chiao Tung UniversityTaichung Veterans General HospitalFinnish Institute for Health and WelfareFrederiksberg HospitalCenter for Clinical Research and PreventionThe University of Texas at San Antonio Health Science CenterAichi Gakuin UniversityShimane UniversityNew York Medical CollegeColorado School of Public HealthZimmer Biomet (Germany)Ludwig-Maximilians-Universität MünchenAlbert Einstein College of MedicineMerck & Co., Inc., Rahway, NJ, USA (United States)Fred Hutch Cancer CenterDuke-NUS Medical SchoolGerman Institute of Human NutritionChinese National Human Genome CenterChinese National Human Genome Center at ShanghaiShanghai Academy of Science & TechnologySarepta Therapeutics (United States)University of MinnesotaInstituto Nacional de Ciencias Médicas y Nutrición Salvador ZubiránTecnológico de MonterreyPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological ResearchWashington University in St. LouisNational Institute on Minority Health and Health DisparitiesThe University of Western AustraliaRoyal Perth HospitalUniversity of Cape TownUniversity of AberdeenBaylor College of MedicineThe University of Texas Health Science Center at HoustonUniversität UlmUniversity of PotsdamCentre National de la Recherche ScientifiqueInstitut Pasteur de LilleEuropean Genomic Institute for DiabetesImperial College Healthcare NHS TrustJackson Memorial HospitalUniversity of Mississippi Medical CenterUniversity of KelaniyaIstituto di Fisiologia ClinicaGenomics EnglandCedars-Sinai Medical CenterInstitute for Molecular Medicine FinlandUniversity of IcelandStanford UniversityBeijing Tongren HospitalCapital Medical UniversityNetherlands Heart InstituteOulu University HospitalUniversity of OuluUniversity of HelsinkiHelsinki University HospitalMinerva FoundationIFB Adiposity DiseasesUniversity of EssexInstitute for Social and Economic ResearchOpen Data InstituteUniversity of DundeeNinewells HospitalKaiser Permanente Washington Health Research InstituteUniversity of California, IrvineFinnish Diabetes AssociationPirkanmaa Hospital DistrictSouth Karelia Central HospitalUniversity of MiamiPaul Langerhans Institute DresdenRoyal College of Surgeons in IrelandKing Abdulaziz UniversityUniversidad Nacional Autónoma de MéxicoNewcastle UniversityKaiser PermanenteThe University of QueenslandKurume UniversityTUM KlinikumTechnical University of MunichChurchill HospitalStanford MedicineOxford BioMedica (United Kingdom)University of LiverpoolUniversity of Manchester Une affiliation ne permet pas de déduire la nationalité d’un auteur.
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