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An integrated encyclopedia of DNA elements in the human genome

19690Citations signalées, ce qui n’est pas une note de qualité
60Institutions déclarées
10Pays d’affiliation déclarés

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Le résumé fourni par la source

The human genome encodes the blueprint of life, but the function of the vast majority of its nearly three billion bases is unknown. The Encyclopedia of DNA Elements (ENCODE) project has systematically mapped regions of transcription, transcription factor association, chromatin structure and histone modification. These data enabled us to assign biochemical functions for 80% of the genome, in particular outside of the well-studied protein-coding regions. Many discovered candidate regulatory elements are physically associated with one another and with expressed genes, providing new insights into the mechanisms of gene regulation. The newly identified elements also show a statistical correspondence to sequence variants linked to human disease, and can thereby guide interpretation of this variation. Overall, the project provides new insights into the organization and regulation of our genes and genome, and is an expansive resource of functional annotations for biomedical research. This overview of the ENCODE project outlines the data accumulated so far, revealing that 80% of the human genome now has at least one biochemical function assigned to it; the newly identified functional elements should aid the interpretation of results of genome-wide association studies, as many correspond to sites of association with human disease. The Encyclopedia of DNA Elements (ENCODE) project has systematically mapped regions of transcription, transcription-factor association, chromatin structure and histone modification. In this overview, the Consortium guides the readers through the project itself, the data and their integrated analyses. Eighty per cent of the human genome now has at least one biochemical function assigned to it. In addition to expanding our understanding of how gene expression is regulated on a genome-wide scale, the newly identified functional elements should help researchers to interpret the results of genome-wide associated studies because many correspond to sites associated with human disease.

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Le contrôle bibliographique ouvert

DOI retrouvé dans Crossref DOI retrouvé ; titre concordant.

Titre Crossref
An integrated encyclopedia of DNA elements in the human genome
Date Crossref
01/09/2012
Éditeur
Springer Science and Business Media LLC
Type
journal-article

Ce recoupement confirme des métadonnées liées au DOI. Il ne confirme ni la méthode ni les conclusions de l’étude, et il ne compte pas comme une seconde source scientifique indépendante.

Les institutions déclarées

European Bioinformatics InstituteLaboratoire de Génie ChimiqueLaboratoire de Génétique CellulaireEmory UniversityStanford UniversitySwitchCold Spring Harbor LaboratoryUniversity of WashingtonUniversity at Albany, State University of New YorkSUNY Polytechnic InstituteBroad InstituteHoward Hughes Medical InstituteUSC Norris Comprehensive Cancer CenterWellcome Sanger InstituteUniversity of Washington Medical CenterBoise State UniversityUniversity of Massachusetts Chan Medical SchoolThe University of Texas at AustinHudsonAlpha Institute for BiotechnologyNational Human Genome Research InstituteUniversity of California, Santa CruzStephens CollegeDuke UniversityDuke Medical CenterUniversity of North Carolina at Chapel HillAlbert Einstein College of MedicineUniversity of California, BerkeleyYale UniversityCalifornia Institute of TechnologyCentre for Genomic RegulationUniversitat Pompeu FabraCentro Nacional de Análisis GenómicoPennsylvania State UniversityBoston UniversityRIKEN Center for Integrative Medical SciencesUniversity of California, IrvineUniversity of ChicagoAffymax (United States)University of LausanneGenome Institute of SingaporeUniversity of GenevaUniversity Hospital of GenevaGeneva CollegeJoint Genome InstituteLawrence Berkeley National LaboratorySpanish National Cancer Research CentreCenter for Life SciencesTsinghua UniversityCornell UniversityWashington University in St. LouisUniversity of California, DavisHarvard UniversityUniversity of Southern CaliforniaThe Ohio State UniversityCancer Research Institute of the Slovak Academy of SciencesHeidelberg UniversityFred Hutch Cancer CenterBehavioral Tech Research, Inc.University of Washington Applied Physics LaboratoryLemuel Shattuck Hospital

Une affiliation ne permet pas de déduire la nationalité d’un auteur.

Les sujets associés

Genomics and Chromatin DynamicsRNA and protein synthesis mechanismsRNA modifications and cancer

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