Karen Fang

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-singleton

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

singleton.wdl inputs and outputs singleton.wdl inputs and outputs DAG (simplified) Inputs Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx Typing Tertiary Analysis DAG …

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github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-family

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

family.wdl inputs and outputs family.wdl inputs and outputs DAG (simplified) Inputs Family Struct Sample Struct Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-family

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

family.wdl inputs and outputs family.wdl inputs and outputs DAG (simplified) Inputs Family Struct Sample Struct Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-singleton

Juniper Ada Lake, Gregory T. Concepcion, William J. Rowell, Heather Ward et autres

singleton.wdl inputs and outputs singleton.wdl inputs and outputs DAG (simplified) Inputs Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx Typing Tertiary Analysis DAG …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-singleton

Juniper Ada Lake, Gregory T. Concepcion, William J. Rowell, Heather Ward et autres

singleton.wdl inputs and outputs singleton.wdl inputs and outputs DAG (simplified) Inputs Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx Typing Tertiary Analysis DAG …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-family

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

family.wdl inputs and outputs family.wdl inputs and outputs DAG (simplified) Inputs Family Struct Sample Struct Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-singleton

Juniper Ada Lake, Gregory T. Concepcion, William J. Rowell, Heather Ward et autres

singleton.wdl inputs and outputs singleton.wdl inputs and outputs DAG (simplified) Inputs Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx Typing Tertiary Analysis DAG …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-family

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

family.wdl inputs and outputs family.wdl inputs and outputs DAG (simplified) Inputs Family Struct Sample Struct Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-family

Juniper Ada Lake, Gregory T. Concepcion, Heather Ward, William J. Rowell et autres

family.wdl inputs and outputs family.wdl inputs and outputs DAG (simplified) Inputs Family Struct Sample Struct Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx …

us (code pays fourni par la source)

github.com/PacificBiosciences/HiFi-human-WGS-WDL/HiFi-human-WGS-WDL-singleton

Juniper Ada Lake, Gregory T. Concepcion, William J. Rowell, Heather Ward et autres

singleton.wdl inputs and outputs singleton.wdl inputs and outputs DAG (simplified) Inputs Outputs Alignments, Coverage, and QC Small Variants (<50 bp) Structural Variants (≥50 bp) Tandem Repeat Genotyping Variant Phasing Variant Calling in Dark Regions 5mCpG Methylation Calling PGx Typing Tertiary Analysis DAG …

us (code pays fourni par la source)

The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology

Erin E. Gill, Baofeng Jia, Carmen Lía Murall, Raphaël Poujol et autres

The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform the public health response. Millions of SARS-CoV-2 genome sequences have been deposited in global public repositories. The Canadian COVID-19 Genomics …

ca (code pays fourni par la source)

Reference data bundle for PacificBiosciences/wdl-humanassembly

Juniper Lake, William J. Rowell, Heather Ward, Karen Fang

Static input files to support alignment of generated assemblies to both GRCh38 and chm13v2.0 references. https://github.com/PacificBiosciences/wdl-humanassembly