Protocol to perform cell-type-specific transcriptome-wide association study using scPrediXcan framework
Yichao Zhou, Sarah Sumner, Temidayo Adeluwa, Lisha Zhu et autres
us, au, sg (code pays fourni par la source)
0 citations
STAR Protocols
Festus M. Nyasimi
Informations fournies par OpenAlex. Research Africa ne déduit ni nationalité, ni poste, ni coordonnées personnelles.
24Publications signalées
71Citations signalées
1Affiliations récentes
Les institutions déclarées
Les domaines associés
Influenza Virus Research StudiesVibrio bacteria research studiesGenetic Associations and EpidemiologyBacteriophages and microbial interactionsRespiratory viral infections research
Les publications récentes
A gene-specific variance-control approach corrects polygenicity-driven inflation observed in transcriptome-wide association studies
Yanyu Liang, Festus M. Nyasimi, Hae Kyung Im
us (code pays fourni par la source)
2 citations
The American Journal of Human Genetics
scPrediXcan integrates deep learning methods and single-cell data into a cell-type-specific transcriptome-wide association study framework
Yichao Zhou, Temidayo Adeluwa, Lisha Zhu, Sofia Salazar-Magaña et autres
us, au, sg (code pays fourni par la source)
9 citations
Cell Genomics
RatXcan: A framework for cross-species integration of genome-wide association and gene expression data
Natasha Santhanam, Sandra Sanchez‐Roige, Sabrina Mi, Yanyu Liang et autres
us (code pays fourni par la source)
0 citations
PLoS Genetics
BrainXcan identifies brain features associated with behavioral and psychiatric traits using large-scale genetic and imaging data
Yanyu Liang, Festus M. Nyasimi, Owen Melia, Timothy J. Carroll et autres
us, gb (code pays fourni par la source)
7 citations
Developmental Cognitive Neuroscience
scPrediXcan integrates advances in deep learning and single-cell data into a powerful cell-type–specific transcriptome-wide association study framework
Yichao Zhou, Temidayo Adeluwa, Lisha Zhu, Sarah Sumner et autres
us, au, sg (code pays fourni par la source)
1 citation
bioRxiv (Cold Spring Harbor Laboratory)
Local patterns of spread of influenza A H3N2 virus in coastal Kenya over a 1-year period revealed through virus sequence data
D. Collins Owuor, Joyce M. Ngoi, Festus M. Nyasimi, Nickson Murunga et autres
Kenya, us, gb (code pays fourni par la source)
0 citations
Scientific Reports
Pervasive polygenicity of complex traits inflates false positive rates in transcriptome-wide association studies
Yanyu Liang, Festus M. Nyasimi, Hae Kyung Im
us (code pays fourni par la source)
18 citations
bioRxiv (Cold Spring Harbor Laboratory)
A mentorship and incubation program using project-based learning to build a professional bioinformatics pipeline in Kenya
Ruth Nanjala, Festus M. Nyasimi, Daniel Masiga, Caleb K. Kibet
Kenya, gb, us (code pays fourni par la source)
7 citations
PLoS Computational Biology
RatXcan: A framework for cross-species integration of genome-wide association and gene expression data
Natasha Santhanam, Sandra Sanchez‐Roige, Sabrina Mi, Yanyu Liang et autres
us (code pays fourni par la source)
3 citations
bioRxiv (Cold Spring Harbor Laboratory)
140-OR: Machine Learning for Metabolite Estimation to Examine Contributors to Glucose Homeostasis and Adiposity: The GUARDIAN Consortium
NICHOLETTE ALLRED, Hannah C. Ainsworth, XIUQING GUO, ADRIENNE W. MACKAY et autres
0 citations
Diabetes
Local patterns of spread of influenza A(H3N2) virus in coastal Kenya over a one-year period revealed through virus sequence data
D. Collins Owuor, Joyce M. Ngoi, Festus M. Nyasimi, Nickson Murunga et autres
Kenya, us, gb (code pays fourni par la source)
2 citations
medRxiv
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