Benchmarking the impact of data leakage on the performance of knowledge graph embedding models for biomedical link prediction
Galadriel Bri`ere, Thomas STOSSKOPF, Benjamin Loire, Anaı̈s Baudot
0 citationsBioinformatics
Anaı̈s Baudot
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126Publications signalées
2871Citations signalées
3Affiliations récentes
Institutions déclarées
Domaines associés
Bioinformatics and Genomic NetworksComputational Drug Discovery MethodsGene expression and cancer classificationComplex Network Analysis TechniquesGenomics and Rare Diseases
Publications récentes
PhenoXtract: combining Large Language Model and Knowledge Graph embedding to extract phenotypes from clinical descriptions
Silvia Berardelli, Galadriel Brière, Benjamin Loire, Federica De Paoli et autres
0 citationsbioRxiv (Cold Spring Harbor Laboratory)
How to organise a scientific competition to benchmark methods and algorithms in computational biology?
Nicolas Homberg, Lucie Lamothe, Elise Amblard, Hugo Barbot et autres
0 citationsHAL (Le Centre pour la Communication Scientifique Directe)
Pylluminator: fast and scalable analysis of DNA methylation data in Python
Elio Fanchon, Benjamin Loire, Jean-Philippe Trani, Frédérique Magdinier et autres
0 citationsBioinformatics Advances
Investigating the Potential Roles of Environmental Exposures on the Pathology of Amyotrophic Lateral Sclerosis by Overlap Analysis
Nazlı Kara, Ozan Özışık, Anaı̈s Baudot, Lenka Šlachtová
0 citationsNeurotoxicity Research
miR ‐140‐5p Overexpression Contributes to Oxidative Stress and Mitochondrial Dysfunction in Hutchinson‐Gilford Progeria Syndrome Fibroblasts Through NRF2 Pathway
Léa Toury, Diane Frankel, Sara Nael, Mario Abaji et autres
1 citationAging Cell
MOTL: enhancing multi-omics matrix factorization with transfer learning
Morgane Térézol, Laura Cantini, Paul Villoutreix, Matthieu Vignes et autres
3 citationsGenome biology
Recommendations for Successful Development and Implementation of Digital Health Technology Tools
Rebecca Ting Jiin Loo, Francesco Nasta, M. Macchi, Anaı̈s Baudot et autres
20 citationsJournal of Medical Internet Research
Benchmark of computational methods to detect digenism in sequencing data
Marie‐Sophie C. Ogloblinsky, Donald F. Conrad, Anaı̈s Baudot, Elisabeth Tournier‐Lasserve et autres
2 citationsEuropean Journal of Human Genetics
Using Networks and Prior Knowledge to Uncover novel Rare Disease Phenotypes
Galadriel Brière, Cécile Beust, Morgane Térézol, Anaı̈s Baudot
1 citationmedRxiv
MODIS: Multi-Omics Data Integration for Small and unpaired datasets
Daniel Lepe-Soltero, Thierry Artières, Anaı̈s Baudot, Paul Villoutreix
0 citationsHAL (Le Centre pour la Communication Scientifique Directe)
Refining Boolean models with the partial most permissive scheme
Nadine Ben Boina, Brigitte Mossé, Anaı̈s Baudot, Élisabeth Rémy
3 citationsBioinformatics
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