Accès ouvert
2015
article
OpenAlex
Andrew D. Yates, Wasiu A. Akanni, M Ridwan Amode, Daniel G. Barrell et autres
The Ensembl project (http://www.ensembl.org) is a system for genome annotation, analysis, storage and dissemination designed to facilitate the access of genomic annotation from chordates and key model organisms. It provides access to data from 87 species across our main and early access …
gb
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Accès ouvert
2015
article
OpenAlex
Paul Julian Kersey, James E. Allen, Irina M. Armean, Sanjay Boddu et autres
Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the context of the Ensembl project (http://www.ensembl.org). Together, the two resources provide a consistent set of programmatic and interactive interfaces to …
gb, us
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Accès ouvert
2014
article
OpenAlex
Fiona M Cunningham, M Ridwan Amode, Daniel G. Barrell, Kathryn M. Beal et autres
Ensembl (http://www.ensembl.org) is a genomic interpretation system providing the most up-to-date annotations, querying tools and access methods for chordates and key model organisms. This year we released updated annotation (gene models, comparative genomics, regulatory regions and variation) on the new human assembly, …
gb
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Accès ouvert
2013
article
OpenAlex
Paul Flicek, M Ridwan Amode, Daniel G. Barrell, Kathryn M. Beal et autres
Ensembl (http://www.ensembl.org) creates tools and data resources to facilitate genomic analysis in chordate species with an emphasis on human, major vertebrate model organisms and farm animals. Over the past year we have increased the number of species that we support to 77 …
gb
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Accès ouvert
2012
article
OpenAlex
Paul Flicek, Ikhlak Ahmed, M Ridwan Amode, Daniel G. Barrell et autres
The Ensembl project (http://www.ensembl.org) provides genome information for sequenced chordate genomes with a particular focus on human, mouse, zebrafish and rat. Our resources include evidenced-based gene sets for all supported species; large-scale whole genome multiple species alignments across vertebrates and clade-specific alignments …
gb
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Accès ouvert
2011
article
OpenAlex
Paul Flicek, M Ridwan Amode, Daniel G. Barrell, Kathryn M. Beal et autres
The Ensembl project (http://www.ensembl.org) provides genome resources for chordate genomes with a particular focus on human genome data as well as data for key model organisms such as mouse, rat and zebrafish. Five additional species were added in the last year including …
gb
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Accès ouvert
2011
article
OpenAlex
R. J. Kinsella, Andreas Kähäri, Syed Haider, Jorge Zamora et autres
For a number of years the BioMart data warehousing system has proven to be a valuable resource for scientists seeking a fast and versatile means of accessing the growing volume of genomic data provided by the Ensembl project. The launch of the …
gb
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Accès ouvert
2011
article
OpenAlex
Giulietta M. Spudich, Xosé M. Fernández
Biological databases are an important resource for the life sciences community. Accessing the hundreds of databases supporting molecular biology and related fields is a daunting and time-consuming task. Integrating this information into one access point is a necessity for the life sciences …
gb
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Accès ouvert
2010
article
OpenAlex
Paul Flicek, M Ridwan Amode, Daniel G. Barrell, Kathryn M. Beal et autres
The Ensembl project (http://www.ensembl.org) seeks to enable genomic science by providing high quality, integrated annotation on chordate and selected eukaryotic genomes within a consistent and accessible infrastructure. All supported species include comprehensive, evidence-based gene annotations and a selected set of genomes includes …
gb
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Accès ouvert
2010
article
OpenAlex
Yuan Chen, Fiona M Cunningham, Daniel Ríos, William M. McLaren et autres
BACKGROUND: The maturing field of genomics is rapidly increasing the number of sequenced genomes and producing more information from those previously sequenced. Much of this additional information is variation data derived from sampling multiple individuals of a given species with the goal …
gb
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Accès ouvert
2010
article
OpenAlex
Giulietta M. Spudich, Xosé M. Fernández
The number of databases in molecular biological fields has rapidly increased to provide a large-scale resource. Though valuable information is available, data can be difficult to access, compare and integrate due to different formats and presentations of web interfaces. This paper offers …
gb
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Accès ouvert
2009
article
OpenAlex
Paul Flicek, Bronwen L. Aken, Benoît Ballester, Kathryn M. Beal et autres
Ensembl (http://www.ensembl.org) integrates genomic information for a comprehensive set of chordate genomes with a particular focus on resources for human, mouse, rat, zebrafish and other high-value sequenced genomes. We provide complete gene annotations for all supported species in addition to specific resources …
gb
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