OxBreaker: species-agnostic pipeline for the analysis of outbreaks using nanopore sequencing
Carlos Reding, Katie M. V. Hopkins, Matthew Colpus, Nicholas D. Sanderson et autres
0 citationsbioRxiv (Cold Spring Harbor Laboratory)
Sarah Oakley
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90Publications signalées
3507Citations signalées
1Affiliations récentes
Institutions déclarées
Domaines associés
Bacterial Identification and Susceptibility TestingAntibiotic Resistance in BacteriaOrthopedic Infections and TreatmentsInfective Endocarditis Diagnosis and ManagementSARS-CoV-2 detection and testing
Publications récentes
Clinical validation of a novel metagenomic nanopore sequencing method for detecting viral respiratory pathogens: diagnostic accuracy study
Nicholas D Sanderson, Kate E. Dingle, Katie Hopkins, Ali Vaughan et autres
1 citationmedRxiv
Estimating the association of antimicrobial resistance genes with minimum inhibitory concentration in Escherichia coli: an observational study
Samuel Lipworth, Kevin Chau, Sarah Oakley, Lucinda Barrett et autres
7 citationsThe Lancet Microbe
Escherichia coli phylogeny drives co-amoxiclav resistance through variable expression of TEM-1 beta-lactamase
William Matlock, Gillian Rodger, Emma Pritchard, Matthew Colpus et autres
4 citationsNature Communications
Nanopore adaptive sampling for bacterial identification from periprosthetic joint replacement tissue
Teresa L. Street, Philip Bejon, Laura Leach, Sarah Oakley et autres
2 citationsMicrobial Genomics
Nanopore adaptive sampling for bacterial identification from periprosthetic joint replacement tissue
Teresa L. Street, Philip Bejon, Laura Leach, Sarah Oakley et autres
2 citationsmedRxiv
Ribosome phenotypes for rapid classification of antibiotic-susceptible and resistant strains of Escherichia coli
Alison Farrar, Piers Turner, Hafez El Sayyed, Conor Feehily et autres
7 citationsCommunications Biology
Comparison of direct cDNA and PCR-cDNA Nanopore sequencing of RNA from Escherichia coli isolates
Gillian Rodger, Samuel Lipworth, Lucinda Barrett, Sarah Oakley et autres
4 citationsMicrobial Genomics
Infection Inspection: using the power of citizen science for image-based prediction of antibiotic resistance in Escherichia coli treated with ciprofloxacin
Alison Farrar, Conor Feehily, Piers Turner, Aleksander Zagajewski et autres
2 citationsScientific Reports
E. coli phylogeny drives co-amoxiclav resistance through variable expression of bla TEM-1
William Matlock, Gillian Rodger, Emma Pritchard, Matthew Colpus et autres
6 citationsbioRxiv (Cold Spring Harbor Laboratory)
Factors influencing general practice nurse's implementation of culturally responsive care, using normalization process theory: A cross‐sectional study
Sarah Oakley, Mary Lou Manning, Anne MacFarlane, Andrew W. Murphy et autres
4 citationsJournal of Advanced Nursing
Ribosome Phenotypes Enable Rapid Antibiotic Susceptibility Testing in Escherichia coli
Alison Farrar, Piers Turner, Hafez El Sayyed, Conor Feehily et autres
1 citationmedRxiv
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