Gengjie Jia

Food Microbiome Project

Yao Wang, Meiyin Zeng, Haifei Yang, Kai Peng et autres

Spatial omics in the AI era: Technologies, algorithmic ecosystems, biological applications, and large model perspectives

haoxiu wang, Xinwang Yang, Siheng Wang, Zhe Yang et autres

Spatial omics technologys help overcome key limitations of conventional omics approaches that lack spatial information, by providing a panoramic perspective from the molecular level to the microenvironment scale for addressing spatially resolved biological questions in life sciences. With the rapid advancement of …

cn, ca, hk, sg, ae, us (code pays fourni par la source)

Author Correction: Spatial immune scoring system predicts hepatocellular carcinoma recurrence

Gengjie Jia, Peiqi He, Tianli Dai, Denise Goh et autres

cn, sg (code pays fourni par la source)

Longitudinal Analysis of Electronic Health Records Reveals Medical Conditions Associated with Subsequent Alzheimer’s Disease Development

Xue Zhong, Gengjie Jia, Zhijun Yin, Kerou Cheng et autres

Background: Several health conditions are known to increase the risk of Alzheimer's disease (AD). We aim to systematically identify medical conditions that are associated with subsequent development of AD by leveraging the growing resources of electronic health records (EHRs). Methods: This retrospective …

us (code pays fourni par la source)

Spatial immune scoring system predicts hepatocellular carcinoma recurrence

Gengjie Jia, Peiqi He, Tianli Dai, Denise Goh et autres

cn, sg (code pays fourni par la source)

Linking dietary fiber to human malady through cumulative profiling of microbiota disturbance

Xin Zhang, Huan Liu, Yu Li, Tiandong Xu et autres

Abstract Dietary fiber influences the composition and metabolic activity of microbial communities, impacting disease development. Current understanding of the intricate fiber‐microbe‐disease tripartite relationship remains fragmented and elusive, urging a systematic investigation. Here, we focused on microbiota disturbance as a robust index to …

cn, hk, dk (code pays fourni par la source)

Zoonotic outbreak risk prediction with long short-term memory models: a case study with schistosomiasis, echinococcosis, and leptospirosis

Chun‐Rong Chen, Zhaoyuan He, Jin Zhao, Xuhui Zhu et autres

BACKGROUND: Zoonotic infections, characterized with huge pathogen diversity, wide affecting area and great society harm, have become a major global public health problem. Early and accurate prediction of their outbreaks is crucial for disease control. The aim of this study was to …

cn (code pays fourni par la source)

Progress and opportunities of foundation models in bioinformatics

Zhihang Hu, Yixuan Wang, Lei Li, Yimin Fan et autres

Bioinformatics has undergone a paradigm shift in artificial intelligence (AI), particularly through foundation models (FMs), which address longstanding challenges in bioinformatics such as limited annotated data and data noise. These AI techniques have demonstrated remarkable efficacy across various downstream validation tasks, effectively …

hk, cn (code pays fourni par la source)

Corrigendum to “Widely targeted metabolomics analysis reveals the major metabolites in the hemp seeds from the longevity village of Bama, China” Ind. Crops. Prod. 206 (2023) 117661]

Zhongting Chen, Shuxia Hao, Zhaoyuan He, Jing Liu et autres

Integrated Pleiotropic Gene Set Unveils Comorbidity Insights across Digestive Cancers and Other Diseases

Xinnan Wu, Guangwen Luo, Zhaonian Dong, Wen Zheng et autres

Comorbidities are prevalent in digestive cancers, intensifying patient discomfort and complicating prognosis. Identifying potential comorbidities and investigating their genetic connections in a systemic manner prove to be instrumental in averting additional health challenges during digestive cancer management. Here, we investigated 150 diseases …

cn (code pays fourni par la source)

The Microbiome Protocols eBook initiative: Building a bridge to microbiome research

Yunyun Gao, Kai Peng, Defeng Bai, Xiaoye Bai et autres

The Microbiome Protocols eBook (MPB) serves as a crucial bridge, filling gaps in microbiome protocols for both wet experiments and data analysis. The first edition, launched in 2020, featured 152 meticulously curated protocols, garnering widespread acclaim. We now extend a sincere invitation …

cn, hk, gb, ee, fi, nl, sg (code pays fourni par la source)

Author Correction: Periodic Table of Food Initiative for generating biomolecular knowledge of edible biodiversity

Andy Jarvis, Jenny Johana Gallo‐Franco, Julian Portilla, Bruce German et autres

co, us, it, de, pe, no, nl, au, cn, ca, in, fj, il, jp, br, tw, th, gb (code pays fourni par la source)