Accès ouvert
2026
software
OpenAlex
Christopher Johnson Markiewicz, Matthew Brett, Michael Hanke, Marc-Alexandre Côté et autres
Release notes Bug-fix release in the 5.4.x series. This release addresses test failures on shallow clones or when run with python -m pytest in Python 3.14+. Bug fixes Adjust tests to not depend on how pytest is run, or deep clones (#1478) …
us, gb, de, ca, ru, fr, gr, ch, it, fi, jp
(code pays fourni par la source)
Accès ouvert
2026
software
OpenAlex
Christopher J. Markiewicz, Matthew Brett, Michael Hanke, Marc-Alexandre Côté et autres
Release notes New feature release in the 5.4.x series. This release requires a minimum Python of 3.10 and NumPy 1.25, and has been tested up to Python 3.14 and NumPy 2.4. New features Add mode parameter to nibabel.processing.conform (#1396) (Clorindo Notte, reviewed …
us, gb, de, ca, ru, fr, gr, ch, it, fi, jp
(code pays fourni par la source)
Accès ouvert
2025
article
OpenAlex
Sarah Asbury, Jonathan Lai, Kelly C. Rilett, Zeeshan Haqqee et autres
Gene-environment interactions in the postnatal period have a long-term impact on neurodevelopment. To effectively assess neurodevelopment in the mouse, we developed a behavioural pipeline that incorporates several validated behavioural tests to measure translationally relevant milestones of behaviour in mice. The behavioral phenotype …
ca, gb, us
(code pays fourni par la source)
Accès ouvert
2022
preprint
OpenAlex
Sarah Asbury, Jonathan Lai, Kelly C. Rilett, Zeeshan Haqqee et autres
Abstract Gene-environment interactions in the postnatal period have a long-term impact on neurodevelopment. To effectively model neurodevelopment in the mouse, we incorporated several validated behavioural tests to develop a behavioural pipeline that measures translationally relevant milestones of development in mice. The behavioral …
ca, gb, us
(code pays fourni par la source)
Accès ouvert
2022
article
OpenAlex
Pegah Abed-Esfahani, Benjamin C Darwin, Derek Howard, Nick Wang et autres
High resolution in situ hybridization (ISH) images of the brain capture spatial gene expression at cellular resolution. These spatial profiles are key to understanding brain organization at the molecular level. Previously, manual qualitative scoring and informatics pipelines have been applied to ISH …
ca, gb
(code pays fourni par la source)
Accès ouvert
2021
preprint
OpenAlex
Pegah Abed-Esfahani, Benjamin C Darwin, Derek Howard, Nick Wang et autres
Abstract High resolution in situ hybridization (ISH) images of the brain capture spatial gene expression at cellular resolution. These spatial profiles are key to understanding brain organization at the molecular level. Previously, manual qualitative scoring and informatics pipelines have been applied to …
ca, gb
(code pays fourni par la source)
Accès ouvert
2020
software
OpenAlex
Matthew Brett, Christopher Johnson Markiewicz, Michael Hanke, Marc-Alexandre Côté et autres
Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre Côté (MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson (EL), Demian Wassermann, Stephan …
gb, us, de, ca, ru, fr, gr, ch, it, fi, in
(code pays fourni par la source)
Accès ouvert
2020
software
OpenAlex
Matthew Brett, Christopher Johnson Markiewicz, Michael Hanke, Marc-Alexandre Côté et autres
Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre Côté (MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson (EL), Demian Wassermann, Stephan …
gb, us, de, ca, ru, fr, gr, ch, it, fi, in
(code pays fourni par la source)
Accès ouvert
2020
software
OpenAlex
Matthew Brett, Christopher Johnson Markiewicz, Michael Hanke, Marc-Alexandre Côté et autres
Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre Côté (MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson (EL), Demian Wassermann, Stephan …
gb, us, de, ca, ru, fr, gr, ch, it, fi, in
(code pays fourni par la source)
Accès ouvert
2020
article
OpenAlex
Harikrishna Rallapalli, Benjamin C Darwin, Estefania Toro-Montoya, Jason P. Lerch et autres
Niemann-Pick Type C (NPC) is a rare genetic disorder characterized by progressive cell death in various tissues, particularly in the cerebellar Purkinje cells, with no known cure. Mouse models for human NPC have been generated and characterized histologically, behaviorally, and using longitudinal …
us, ca
(code pays fourni par la source)
Accès ouvert
2020
software
OpenAlex
Matthew Brett, Christopher Johnson Markiewicz, Michael Hanke, Marc-Alexandre Côté et autres
3.1.0 (Monday 20 April 2020) New feature release in the 3.1.x series. New features Conformation function (processing.conform) and CLI tool (nib-conform) to apply shape, orientation and zooms (pr/853) (Jakub Kaczmarzyk, reviewed by CM, YOH) Affine rescaling function (affines.rescale_affine) to update dimensions and …
gb, us, de, ca, ru, fr, gr, ch, in
(code pays fourni par la source)
Accès ouvert
2020
software
OpenAlex
Matthew Brett, Christopher Johnson Markiewicz, Michael Hanke, Marc-Alexandre Côté et autres
Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre Côté (MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson (EL), Demian Wassermann, and …
gb, us, de, ca, ru, fr, gr, ch, in
(code pays fourni par la source)