Karel Estrada

Apptainer SIF for Rapdtool pipeline

Karel Estrada

RaPDTool offers a simple, easy-to-use workflow for microbial-community profiling, contig binning and "genomic-distance" exploration by chaining several bioinformatic tools into a single pipeline

Apptainer SIF for Rapdtool pipeline

Karel Estrada

RaPDTool offers a simple, easy-to-use workflow for microbial-community profiling, contig binning and "genomic-distance" exploration by chaining several bioinformatic tools into a single pipeline

RTFocusDB

Karel Estrada

Focus database for Rapdtool pipeline (https://github.com/kjestradag/RaPDTool)

RTFocusDB

Karel Estrada

Focus database for Rapdtool pipeline (https://github.com/kjestradag/RaPDTool)

Taenia solium extracellular vesicles decrease reactive oxygen species production in human neutrophils by inhibiting myeloperoxidase activity

César Díaz-Godínez, Diana G. Ríos-Valencia, Andrea Toledo, Arturo Calderón-Gallegos et autres

Taenia solium cysticerci are the etiological agents of neurocysticercosis, a leading cause of acquired epilepsy worldwide and a significant public health problem in endemic regions. The chronicity of the infection reflects a complex host-parasite interaction in which the parasite establishes long-term persistence …

mx (code pays fourni par la source)

Babesia hegotelforum sp. nov., a zoonotic Babesia species previously referred to as Babesia sp. MO1

Pallavi Singh, Karel Estrada, Luís Miguel González, Ricardo Grande et autres

A zoonotic Babesia species previously referred to as Babesia sp. MO1 is formally described and named here as Babesia hegotelforum sp. nov. This taxon is distinct from Babesia divergens based on genome-wide sequence divergence, phylogenetic placement, host associations, and clinical presentation. The …

Babesia hegotelforum sp. nov., a zoonotic Babesia species previously referred to as Babesia sp. MO1

Pallavi Singh, Karel Estrada, Luís Miguel González, Ricardo Grande et autres

A zoonotic Babesia species previously referred to as Babesia sp. MO1 is formally described and named here as Babesia hegotelforum sp. nov. This taxon is distinct from Babesia divergens based on genome-wide sequence divergence, phylogenetic placement, host associations, and clinical presentation. The …

Babesia hegotelforum sp. nov., a zoonotic Babesia species previously referred to as Babesia sp . MO1

Pallavi Singh, Karel Estrada, Luís Miguel González, Ricardo Grande et autres

A zoonotic Babesia species previously referred to as Babesia sp. MO1 is formally described and named here as Babesia hegotelforum sp. nov. This taxon is distinct from Babesia divergens based on genome-wide sequence divergence, phylogenetic placement, host associations, and clinical presentation. The …

us, mx, es, fr (code pays fourni par la source)

Physicochemical and microbiome changes in queso Crema de Chiapas during ripening

Blanca Nayelli Ocampo Morales, Arturo Hernández Montes, Karel Estrada, Ernestina Valadez Moctezuma

The dynamic changes in the physicochemical, microbiological, and metagenomic profiles of Crema de Chiapas cheese were evaluated across three ripening stages (2, 29, and 58 days). Although the main physicochemical properties -including fat content- remained remarkably stable, salt and protein levels showed …

mx (code pays fourni par la source)

Azotobacter vinelandii AmrZ is a global regulator linking alginate production and c-di-GMP homeostasis

MIRIAM CITLALLI GONZAGA-PEREZ, Carlos L. Ahumada-Manuel, Josefina Guzmán, Karel Estrada et autres

Abstract Azotobacter vinelandii , a member of the Pseudomonadaceae, produces the exopolysaccharide alginate during vegetative growth; however, the circuitry linking alginate biosynthesis to lifestyle transitions remains poorly defined. Here we show that the Ribbon–Helix–Helix (RHH) transcription factor AmrZ coordinates alginate production, intracellular …

mx (code pays fourni par la source)

Physicochemical and microbiome changes in queso crema de Chiapas during ripening

Blanca Nayelli Ocampo Morales, Arturo Hernández-Montes, Karel Estrada, Ernestina Valadez‐Moctezuma

Abstract The dynamic transformations of physicochemical, microbiological, and metagenomic profiles in Queso Crema de Chiapas were studied during distinct ripening stages (2, 29, and 58 days). While the fundamental physicochemical characteristics—including protein, fat, and salt content—remained remarkably stable, a distinctive evolution in …

Comparative Analysis of Immune Response Genes Induced by a Virulent or Attenuated Strain of Babesia bigemina

Grecia Martínez-García, Karel Estrada, José J. Lira-Amaya, Rebeca M. Santamaria-Epinosa et autres

RNA-seq technology has been widely used for the characterization of the transcriptome profile induced by several diseases in both humans and animals. In the present study, RNA-seq was used to identify the differential expression of genes associated with the immune response in …

mx (code pays fourni par la source)