Exploring differences across pangenome-graph representations using Escherichia coli O157:H7 as a model
Peilin Liu, Kaixin Hu, Lapo Mughini‐Gras, Aldert Zomer et autres
0 citationsGenomics
Aldert Zomer
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217Publications signalées
7534Citations signalées
4Affiliations récentes
Institutions déclarées
Domaines associés
Genomics and Phylogenetic StudiesSalmonella and Campylobacter epidemiologyGut microbiota and healthProbiotics and Fermented FoodsAntibiotic Resistance in Bacteria
Publications récentes
Molecular Epidemiology and Drug Resistance of Extraintestinal Pathogenic Escherichia coli Bloodstream Isolates From Adults Worldwide (2011–2023)
Mark de Been, Wannisa Ritmahan, Aldert Zomer, Oscar Go et autres
0 citationsClinical Infectious Diseases
Performance of the IR Biotyper, Nanopore, and Illumina sequencing to discriminate Escherichia coli strains originating from poultry
Jeroen Leus, Annet Heuvelink, Max Schellekens, Arjen Timmerman et autres
0 citationsMicrobiology Spectrum
Molecular epidemiology and structural diversity of O101/O162 O-antigen variants among Escherichia coli bacteremia isolates
Eveline Weerdenburg, Mark de Been, Aldert Zomer, Wannisa Ritmahan et autres
0 citationsScientific Reports
Pharmacokinetics of Long‐Acting Ampicillin and Its Impact on the Gut Microbiome and Resistome in Rhesus Macaques ( Macaca mulatta )
Annemiek Maaskant, Ingeborg M. van Geijlswijk, Mathias Devreese, Marc Cherlet et autres
0 citationsJournal of Veterinary Pharmacology and Therapeutics
Impact of reducing colistin use on colistin resistance in Escherichia coli isolated from humans and poultry in Indonesia (COINCIDE): A protocol for a multisectoral, transdisciplinary One Health study
Soe Yu Naing, Juliëtte Severin, Aldert Zomer, Kuntaman Kuntaman et autres
2 citationsOne Health
Targeted isolation of bacteria with potential to competitively exclude Staphylococcus aureus in the upper respiratory tract of pigs
Abel A. Vlasblom, Shriram Patel, Peadar G. Lawlor, Marcus J. Claesson et autres
0 citationsBMC Microbiology
Prophage φEr670 and Genomic Island GI_Er147 as Carriers of Resistance Genes in Erysipelothrix rhusiopathiae Strains
Marta Dec, Aldert Zomer, Marian J. Broekhuizen-Stins, R Urban-Chmiel
0 citationsInternational Journal of Molecular Sciences
MetaPointFinder: Detection of Antimicrobial Resistance-Conferring Point Mutations (ARMs) from Metagenomic Reads
Aldert Zomer, Sam Nooij, Cailean Carter, Alison E. Mather
1 citationbioRxiv (Cold Spring Harbor Laboratory)
Bacterial cell-free DNA profiling reveals the co-elevation of multiple bacteria in newborn foals with suspected sepsis
Li‐Ting Chen, Emmy Wesdorp, Myrthe Jager, Esther W. Siegers et autres
0 citationsiScience
Barbell Resolves Demultiplexing and Trimming Issues in Nanopore Data
Rick Beeloo, Ragnar Groot Koerkamp, Xiu Jia, Marian J. Broekhuizen‐Stins et autres
3 citationsbioRxiv (Cold Spring Harbor Laboratory)
Combining mucosal microbiome and host multi-omics data shows prognostic potential in paediatric ulcerative colitis
Maria Kulecka, Rachel S. Fitzgerald, Ana Velikonja, Chloe E. Huseyin et autres
14 citationsNature Communications
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