Martin Kapun

FloKu/publication_AsturGenomics: AsturGenomics_1.3

FlorianKunz, Min J. Chai, Martin Schwentner, Frank E. Zachos et autres

Astur Genomics 1. Overview This repository contains code and data used in: Publication: Goshawk genomics: Genome wide Single Nucleotide Polymorphisms (SNPs) confirm Species Status of Astur gentilis and Astur atricapillus Authors:Florian Kunz1,2, Min Chai2,3, Martin Schwentner4, Frank Emmanuel Zachos3,5,6,7, Martin Kapun2, Elisabeth …

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FloKu/publication_AsturGenomics: AsturGenomics_1.3

Florian Kunz, Min J. Chai, Martin Schwentner, Frank E. Zachos et autres

Astur Genomics 1. Overview This repository contains code and data used in: Publication: Goshawk genomics: Genome wide Single Nucleotide Polymorphisms (SNPs) confirm Species Status of Astur gentilis and Astur atricapillus Authors:Florian Kunz1,2, Min Chai2,3, Martin Schwentner4, Frank Emmanuel Zachos3,5,6,7, Martin Kapun2, Elisabeth …

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pastForward: a Snakemake pipeline for ancient and historical DNA with eukaryote-wide taxonomic screening and tracking of copy-number variation

Sarah Saadain, Martin Kapun, Robert Kofler

Abstract Ancient and historical DNA has the potential to resolve many open questions in biology. While pipelines for processing ancient and historical DNA exist, none combine user-friendly, configurable processing with copy number variation tracking and targeted taxonomic profiling. Therefore, we developed pastForward, …

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The fate of a dynasty: Population genomics uncovers the demographic history of Ardea insignis , one of the rarest bird species in the world

Martin Kapun, Tshering Tobgay, Alexandra Wanka, Wolfgang Fiedler et autres

Abstract The White-bellied Heron ( Ardea insignis ) is one of the world’s rarest birds, with fewer than 60 known individuals remaining in the wild. Whether this extreme rarity reflects a recent anthropogenic collapse or a long history of persistently small population …

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Environmental filtering across seasons and host-associated selection shape the gut microbiome of sympatric European Sepsis dung flies

Martin Kapun, Jeannine Roy, Wolf U. Blanckenhorn

Abstract Animal microbiomes are shaped by both environmental exposure and host-associated filtering, but the relative importance of these processes remains poorly understood. Dung-associated insects provide an ideal model because they develop and feed in highly dynamic microbial environments. We investigated the gut …

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ddRAD raw data for Pica pica (Aves: Corvidae) - Additional material (raw data of the ddRAD analysis) to Kryukov et al. (2022): "Introgression at the emerging secondary contact zone of magpie Pica pica subspecies (Aves: Corvidae): integrating data on nuclear and mitochondrial markers, vocalizations, and field observations"

Elisabeth Haring, Martin Kapun, Kirill A. Kryukov, Alexey P. Kryukov

Raw ddRad dataset and SNP dataset for the paper by Kryukov et al. (2022): "Introgression at the emerging secondary contact zone of magpie Pica pica subspecies (Aves: Corvidae): integrating data on nuclear and mitochondrial markers, vocalizations, and field observations"

Erratum to: “Quantitative and qualitative statistical analyses of the shell and the genital traits of the doorsnail genus Montenegrina O. Boettger, 1877 (Gastropoda, Clausiliidae)”

Willy De Mattia, Elisabeth Haring, Martin Kapun, Zoltan Fehér et autres

FloKu/publication_AsturGenomics: AsturGenomics

FlorianKunz, Min J. Chai, Martin Schwentner, Frank E. Zachos et autres

Updated Accipiter to Astur

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From historical expedition diaries to whole genome sequencing: A case study of the likely extinct Red Sea torpedo ray

Anja Palandacic, Martin Kapun, Carola Greve, Tilman Schell et autres

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Supplementary Material for Quantitative and qualitative statistical analyses of the shell and the genital traits of the doorsnail genus Montenegrina O. Boettger, 1877 (Gastropoda: Clausiliidae)

Willy De Mattia, Elisabeth Haring, Martin Kapun, Zóltan Fehér et autres

The importance of genital morphology for alpha- and supraspecific taxonomy of pulmonate land snails has been known since the 19th century. Despite that, the genital anatomy of the family Clausiliidae has been considered of low discriminatory importance at the species level, although …

Natural Variation in Drosophila melanogaster Clock PolyQ Length: Geographic Gradients and Functional Properties

Maya Yair, Bettina Fishman, Martin Kapun, Eran Tauber

Natural variation in circadian clock genes provides a powerful framework for understanding how organisms respond to environmental heterogeneity. The Clock ( Clk ) gene encodes a core transcriptional regulator of circadian rhythms and contains a polymorphic polyglutamine (polyQ) tract whose evolutionary significance …

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Ecology and Diversity of Urban Drosophila Species Communities as Potential Indicators of Biodiversity Decline

Martin Kapun, Sonja Steindl, Maria Ricci, Manuel Löhnertz et autres

ABSTRACT Understanding the impact of ecological factors on biodiversity is central in the context of accelerating climate change and biodiversity loss. Urban areas, as landscapes under particularly strong anthropogenic influence, are undergoing rapid ecological change, yet the consequences for urban biodiversity and …

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