Jasper J. Koehorst

IBISBA: Digitalisation to empower biotechnology and drive biomanufacturing

Brett Metcalfe, Jasper J. Koehorst, Theodore Dalamagas, Georgios K. Georgakilas et autres

nl, gr, fr (code pays fourni par la source)

MIxS: Minimum Information about any (x) Sequence

Genomic Standards Consortium, Chris Hunter, Chris Mungall, Folker Meyer et autres

The Minimum Information about any (x) Sequence (MIxS) specification is a set of community-developed standards for describing sequences and their associated metadata. MIxS provides checklists and environmental extensions to ensure that sequence data is accompanied by standardized contextual information, enabling data discovery, …

MIxS: Minimum Information about any (x) Sequence

Genomic Standards Consortium, Chris Hunter, Chris Mungall, Folker Meyer et autres

The Minimum Information about any (x) Sequence (MIxS) specification is a set of community-developed standards for describing sequences and their associated metadata. MIxS provides checklists and environmental extensions to ensure that sequence data is accompanied by standardized contextual information, enabling data discovery, …

MIxS: Minimum Information about any (x) Sequence

Genomic Standards Consortium, Chris Hunter, Chris Mungall, Folker Meyer et autres

The Minimum Information about any (x) Sequence (MIxS) specification is a set of community-developed standards for describing sequences and their associated metadata. MIxS provides checklists and environmental extensions to ensure that sequence data is accompanied by standardized contextual information, enabling data discovery, …

MIxS: Minimum Information about any (x) Sequence

Genomic Standards Consortium, Chris Hunter, Chris Mungall, Folker Meyer et autres

The Minimum Information about any (x) Sequence (MIxS) specification is a set of community-developed standards for describing sequences and their associated metadata. MIxS provides checklists and environmental extensions to ensure that sequence data is accompanied by standardized contextual information, enabling data discovery, …

RO-Crate Metadata Specification 1.3.0

Peter Sefton, Eoghan Ó Carragáin, Stian Soiland‐Reyes, Óscar Corcho et autres

Web-version: https://w3id.org/ro/crate/1.3 This document specifies a method, known as RO-Crate (Research Object Crate), of aggregating and describing data for distribution, re-use, publishing, preservation and archiving. RO-Crates aggregate data into a Dataset, and may describe any resource including files, URI-addressable resources, or use …

au, ie, gb, es, pl, be, us, nl, it, fr, nz, de, ch, si, cn, jp, at, br, no (code pays fourni par la source)

RO-Crate Metadata Specification 1.3.0

Peter Sefton, Eoghan Ó Carragáin, Stian Soiland-Reyes, Óscar Corcho et autres

Web-version: https://w3id.org/ro/crate/1.3 This document specifies a method, known as RO-Crate (Research Object Crate), of aggregating and describing data for distribution, re-use, publishing, preservation and archiving. RO-Crates aggregate data into a Dataset, and may describe any resource including files, URI-addressable resources, or use …

LEAF: Lightweight equipment adapter framework

Matthew Crowther, Brett Metcalfe, Carlos Suarez, David Camilo Corrales et autres

Background As our understanding of complex (biological) systems within the (life) sciences increases, so does the continuous demand for data to maintain that understanding. New approaches for knowledge generation, real-time prediction, and decision-making, such as machine learning, do not reduce this data …

gb, nl, co, fr, Maroc (code pays fourni par la source)

STAMM: Soft sensor moniToring and mAintenance framework for Machine learning Models

Carlos Alberto Suarez Muñoz, Jairo Alexander Astudillo Lagos, Brett Metcalfe, Matthew Crowther et autres

STAMM ( S oft sensor moni T oring and m A intenance framework for M achine learning M odels) is an open-source MLOps framework for industrial machine-learning soft sensors. Unlike general-purpose MLOps platforms (MLflow, Kubeflow, Metaflow, ClearML), STAMM targets the regime where …

co, fr, nl, gb, mx (code pays fourni par la source)

Lightweight Equipment Adapter Framework

Matthew Crowther, Brett Metcalfe, Carlos Alberto Suarez Muñoz, David Camilo Corrales et autres

Adapter Framework for Equipment Monitoring and Control The Lightweight Equipment Adapter Framework (LEAF) implements an Adapter Architecture designed to monitor and control various equipment types (e.g., bioreactors). The core principle of LEAF is to reduce the barrier to entry as much as …

nl, co, fr, gb (code pays fourni par la source)

Lightweight Equipment Adapter Framework

Matthew Crowther, Brett Metcalfe, Carlos Alberto Suarez Muñoz, David Camilo Corrales et autres

Adapter Framework for Equipment Monitoring and Control The Lightweight Equipment Adapter Framework (LEAF) implements an Adapter Architecture designed to monitor and control various equipment types (e.g., bioreactors). The core principle of LEAF is to reduce the barrier to entry as much as …

nl, co, fr, gb (code pays fourni par la source)

A metadata managed FAIR end-to-end workflow for microbial community Omics data analysis

Changlin Ke, Jasper J. Koehorst, Bart Nijsse, William T. Scott et autres

Background: Molecular profiling using high-throughput omics technologies has tremendously increased our ability to interrogate complex microbial communities at the molecular level. In the context of data reuse, the FAIRification of these extensive datasets is frequently perceived as a secondary administrative task, addressed …

nl (code pays fourni par la source)