NeoSplice: a bioinformatics method for prediction of splice variant neoantigens
Shengjie Chai, Christof C. Smith, Tavleen K. Kochar, Sally A. Hunsucker et autres
43 citationsBioinformatics Advances
Jan F. Prins
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188Publications signalées
20300Citations signalées
2Affiliations récentes
Institutions déclarées
Domaines associés
Parallel Computing and Optimization TechniquesDistributed and Parallel Computing SystemsSingle-cell and spatial transcriptomicsCloud Computing and Resource ManagementRNA Research and Splicing
Publications récentes
Characterizing and Mitigating Work Time Inflation in Task Parallel Programs
Jan F. Prins, Martin Schulz, Stephen L. Olivier, Bronis R. de Supinski
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
Enhancing brush tyre model accuracy through friction measurements
A O'Neill, Jan F. Prins, John F. Watts, Patrick Gruber
30 citationsVehicle System Dynamics
EnD-Seq and AppEnD: sequencing 3′ ends to identify nontemplated tails and degradation intermediates
Jan F. Prins, Michael K. Slevin, Robert J. Duronio, William F. Marzluff et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
DiffSplice: the genome-wide detection of differential splicing events with RNA-seq
Christian F. Orellana, Jinze Liu, Ying Du, Liza Makowski et autres
6 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
Deep Sequencing Shows Multiple Oligouridylations Are Required for 3′ to 5′ Degradation of Histone mRNAs on Polyribosomes
Jan F. Prins, Robert E. Rhoads, Stacie Meaux, Paula L. Miliani de Marval et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery
Xiaping He, Darshan Singh, James N. MacLeod, Piotr A. Mieczkowski et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
BlackOPs: increasing confidence in variant detection through mappability filtering
Christopher R. Cabanski, D. Neil Hayes, Jan F. Prins, Charles M. Perou et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
A Robust Method for Transcript Quantification with RNA-Seq Data
Yufeng Liu, Yin Hu, Jan F. Prins, Derek Y. Chiang et autres
1 citationCarolina Digital Repository (University of North Carolina at Chapel Hill)
Pseudogenes transcribed in breast invasive carcinoma show subtype-specific expression and ceRNA potential
Joshua D. Welch, Jan F. Prins, Charles M. Perou, Jeanette Baran‐Gale et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
A probabilistic framework for aligning paired-end RNA-seq data
Derek Y. Chiang, Jan F. Prins, Yin Hu, Xiaping He et autres
2 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
FDM: a graph-based statistical method to detect differential transcription using RNA-seq data
Yufeng Liu, Corbin D. Jones, Jan F. Prins, Darshan Singh et autres
0 citationsCarolina Digital Repository (University of North Carolina at Chapel Hill)
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