Accès ouvert déclaré2026software

nextstrain/nextclade_data: 2026-09-07--17-10-15Z

Ivan Aksamentov, Cornelius Roemer, Nextstrain bot, Richard Neher, James Siqueira, Nadia Neuner-Jehle, John SJ Anderson, mazeller, Anna (Anya) Parker, Jennifer Chang, isabeljoia, NeherLab bot, Filipe Dezordi, Kim Andrews, John Huddleston, Jordan Ort, Laboratoire des Maladies Infectieuses Virales Vétérinaires, Lydia Andreyevna Krasilnikova, Mary Godec, Chaoran Chen, ITpS, Thomas Sibley, james hadfield

0Citations signalées
9Institutions associées
4Pays d’affiliation

Résumé fourni par la source

This release contains changes for datasets: SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs) SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins) SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86) SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs) Include the 2 newly designated Nextstrain clades 26A (XFG.1.1) and 26B (XFG.3.4.1). See https://github.com/nextstrain/ncov/pull/1204 and https://github.com/nextstrain/ncov/pull/1206 for details. Add all 114 Pango lineages newly designated between 2026-06-09 and 2026-09-06. Unfold below to see a list of all newly included lineages with their designation dates: Newly included lineages, with designation date in parentheses RV.2 (2026-06-09) RV.2.1 (2026-06-09) RC.12 (2026-06-09) SZ.1 (2026-06-09) XFG.5.1.8 (2026-06-10) RW.1.1.1 (2026-06-16) RW.1.1.2 (2026-06-16) RW.1.1.3 (2026-06-16) SZ.2 (2026-06-16) SZ.3 (2026-06-16) XFG.14.8.1 (2026-06-23) TA.1 (2026-06-23) TB.1 (2026-06-23) RV.1.1.1 (2026-06-23) TB.2 (2026-06-23) XHA (2026-06-23) XFN.3 (2026-06-24) XFG.6.13.1 (2026-06-25) XFG.6.13.2 (2026-06-25) SV.4 (2026-06-25) SV.4.1 (2026-06-25) SV.3 (2026-06-25) PQ.17.13 (2026-06-25) TC.1 (2026-06-25) SZ.4 (2026-06-29) SZ.3.1 (2026-06-29) XHB (2026-07-07) XFZ.4 (2026-07-09) SW.3 (2026-07-09) SW.2.1 (2026-07-09) XFG.6.15 (2026-07-09) QF.7.2 (2026-07-09) SV.1.2 (2026-07-15) RF.6 (2026-07-20) RF.5.4 (2026-07-20) RE.4.1 (2026-07-20) RE.4.2 (2026-07-20) RE.1.3 (2026-07-20) RE.1.2.2 (2026-07-20) RE.1.2.1 (2026-07-20) RE.1.1.7 (2026-07-20) RE.1.1.8 (2026-07-20) SS.1.1 (2026-07-20) RE.1.1.9 (2026-07-20) RE.2.4.1 (2026-07-20) PQ.2.5.7 (2026-07-20) TD.1 (2026-07-20) PJ.2 (2026-07-20) PJ.2.1 (2026-07-20) XHC (2026-08-03) SV.4.2 (2026-08-03) SV.4.3 (2026-08-03) SV.1.2.1 (2026-08-03) SV.2.2 (2026-08-03) RF.5.3.1 (2026-08-03) QF.2.6.1 (2026-08-03) TE.1 (2026-08-03) XFZ.4.1 (2026-08-03) PQ.2.4.5 (2026-08-03) TF.1 (2026-08-03) XFG.1.1.8 (2026-08-03) RC.13 (2026-08-03) XFZ.5 (2026-08-17) XFZ.5.1 (2026-08-17) RV.2.1.1 (2026-08-17) RV.1.5 (2026-08-17) XFG.2.5.2 (2026-08-17) RK.1.4 (2026-08-17) RK.1.5 (2026-08-17) RK.1.2.1 (2026-08-17) SV.2.3 (2026-08-17) SV.2.4 (2026-08-17) SV.1.3 (2026-08-17) SV.1.4 (2026-08-17) SV.5 (2026-08-17) RF.5.4.1 (2026-08-17) RF.5.4.2 (2026-08-17) XFZ.6 (2026-08-17) SV.2.5 (2026-08-17) SV.2.6 (2026-08-17) RF.5.3.2 (2026-08-17) TG.1 (2026-08-20) TH.1 (2026-08-20) SB.1.1.1 (2026-08-22) XHD (2026-08-22) XHE (2026-08-22) SV.1.4.1 (2026-08-23) TJ.1 (2026-08-25) TJ.1.1 (2026-08-25) RV.3 (2026-08-25) TK.1 (2026-08-25) RK.1.2.2 (2026-08-25) RK.1.2.3 (2026-08-25) RK.1.3.1 (2026-08-25) RK.1.6 (2026-08-25) SV.2.7 (2026-08-25) SV.2.6.1 (2026-08-25) SV.2.8 (2026-08-25) SV.1.5 (2026-08-25) SV.1.6 (2026-08-25) XFZ.4.1.1 (2026-08-25) XFZ.4.1.2 (2026-08-25) XFG.1.1.9 (2026-08-27) XFG.1.1.10 (2026-08-27) XFG.1.1.11 (2026-08-27) XFG.1.1.12 (2026-08-27) XFG.1.1.13 (2026-08-27) TL.1 (2026-08-27) QY.2.1.2 (2026-08-27) RP.2.1 (2026-08-27) RC.1.1 (2026-08-27) RC.1.2 (2026-08-27) RC.1.3 (2026-08-27) RC.1.4 (2026-08-27) SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins) Include the 2 newly designated Nextstrain clades 26A (XFG.1.1) and 26B (XFG.3.4.1). See https://github.com/nextstrain/ncov/pull/1204 and https://github.com/nextstrain/ncov/pull/1206 for details. Add all 114 Pango lineages newly designated between 2026-06-09 and 2026-09-06. Unfold below to see a list of all newly included lineages with their designation dates: Newly included lineages, with designation date in parentheses RV.2 (2026-06-09) RV.2.1 (2026-06-09) RC.12 (2026-06-09) SZ.1 (2026-06-09) XFG.5.1.8 (2026-06-10) RW.1.1.1 (2026-06-16) RW.1.1.2 (2026-06-16) RW.1.1.3 (2026-06-16) SZ.2 (2026-06-16) SZ.3 (2026-06-16) XFG.14.8.1 (2026-06-23) TA.1 (2026-06-23) TB.1 (2026-06-23) RV.1.1.1 (2026-06-23) TB.2 (2026-06-23) XHA (2026-06-23) XFN.3 (2026-06-24) XFG.6.13.1 (2026-06-25) XFG.6.13.2 (2026-06-25) SV.4 (2026-06-25) SV.4.1 (2026-06-25) SV.3 (2026-06-25) PQ.17.13 (2026-06-25) TC.1 (2026-06-25) SZ.4 (2026-06-29) SZ.3.1 (2026-06-29) XHB (2026-07-07) XFZ.4 (2026-07-09) SW.3 (2026-07-09) SW.2.1 (2026-07-09) XFG.6.15 (2026-07-09) QF.7.2 (2026-07-09) SV.1.2 (2026-07-15) RF.6 (2026-07-20) RF.5.4 (2026-07-20) RE.4.1 (2026-07-20) RE.4.2 (2026-07-20) RE.1.3 (2026-07-20) RE.1.2.2 (2026-07-20) RE.1.2.1 (2026-07-20) RE.1.1.7 (2026-07-20) RE.1.1.8 (2026-07-20) SS.1.1 (2026-07-20) RE.1.1.9 (2026-07-20) RE.2.4.1 (2026-07-20) PQ.2.5.7 (2026-07-20) TD.1 (2026-07-20) PJ.2 (2026-07-20) PJ.2.1 (2026-07-20) XHC (2026-08-03) SV.4.2 (2026-08-03) SV.4.3 (2026-08-03) SV.1.2.1 (2026-08-03) SV.2.2 (2026-08-03) RF.5.3.1 (2026-08-03) QF.2.6.1 (2026-08-03) TE.1 (2026-08-03) XFZ.4.1 (2026-08-03) PQ.2.4.5 (2026-08-03) TF.1 (2026-08-03) XFG.1.1.8 (2026-08-03) RC.13 (2026-08-03) XFZ.5 (2026-08-17) XFZ.5.1 (2026-08-17) RV.2.1.1 (2026-08-17) RV.1.5 (2026-08-17) XFG.2.5.2 (2026-08-17) RK.1.4 (2026-08-17) RK.1.5 (2026-08-17) RK.1.2.1 (2026-08-17) SV.2.3 (2026-08-17) SV.2.4 (2026-08-17) SV.1.3 (2026-08-17) SV.1.4 (2026-08-17) SV.5 (2026-08-17) RF.5.4.1 (2026-08-17) RF.5.4.2 (2026-08-17) XFZ.6 (2026-08-17) SV.2.5 (2026-08-17) SV.2.6 (2026-08-17) RF.5.3.2 (2026-08-17) TG.1 (2026-08-20) TH.1 (2026-08-20) SB.1.1.1 (2026-08-22) XHD (2026-08-22) XHE (2026-08-22) SV.1.4.1 (2026-08-23) TJ.1 (2026-08-25) TJ.1.1 (2026-08-25) RV.3 (2026-08-25) TK.1 (2026-08-25) RK.1.2.2 (2026-08-25) RK.1.2.3 (2026-08-25) RK.1.3.1 (2026-08-25) RK.1.6 (2026-08-25) SV.2.7 (2026-08-25) SV.2.6.1 (2026-08-25) SV.2.8 (2026-08-25) SV.1.5 (2026-08-25) SV.1.6 (2026-08-25) XFZ.4.1.1 (2026-08-25) XFZ.4.1.2 (2026-08-25) XFG.1.1.9 (2026-08-27) XFG.1.1.10 (2026-08-27) XFG.1.1.11 (2026-08-27) XFG.1.1.12 (2026-08-27) XFG.1.1.13 (2026-08-27) TL.1 (2026-08-27) QY.2.1.2 (2026-08-27) RP.2.1 (2026-08-27) RC.1.1 (2026-08-27) RC.1.2 (2026-08-27) RC.1.3 (2026-08-27) RC.1.4 (2026-08-27) SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86) Include the 2 newly designated Nextstrain clades 26A (XFG.1.1) and 26B (XFG.3.4.1). See https://github.com/nextstrain/ncov/pull/1204 and https://github.com/nextstrain/ncov/pull/1206 for details. Add all 114 Pango lineages newly designated between 2026-06-09 and 2026-09-06. Unfold below to see a list of all newly included lineages with their designation dates: Newly included lineages, with designation date in parentheses RV.2 (2026-06-09) RV.2.1 (2026-06-09) RC.12 (2026-06-09) SZ.1 (2026-06-09) XFG.5.1.8 (2026-06-10) RW.1.1.1 (2026-06-16) RW.1.1.2 (2026-06-16) RW.1.1.3 (2026-06-16) SZ.2 (2026-06-16) SZ.3 (2026-06-16) XFG.14.8.1 (2026-06-23) TA.1 (2026-06-23) TB.1 (2026-06-23) RV.1.1.1 (2026-06-23) TB.2 (2026-06-23) XHA (2026-06-23) XFN.3 (2026-06-24) XFG.6.13.1 (2026-06-25) XFG.6.13.2 (2026-06-25) SV.4 (2026-06-25) SV.4.1 (2026-06-25) SV.3 (2026-06-25) PQ.17.13 (2026-06-25) TC.1 (2026-06-25) SZ.4 (2026-06-29) SZ.3.1 (2026-06-29) XHB (2026-07-07) XFZ.4 (2026-07-09) SW.3 (2026-07-09) SW.2.1 (2026-07-09) XFG.6.15 (2026-07-09) QF.7.2 (2026-07-09) SV.1.2 (2026-07-15) RF.6 (2026-07-20) RF.5.4 (2026-07-20) RE.4.1 (2026-07-20) RE.4.2 (2026-07-20) RE.1.3 (2026-07-20) RE.1.2.2 (2026-07-20) RE.1.2.1 (2026-07-20) RE.1.1.7 (2026-07-20) RE.1.1.8 (2026-07-20) SS.1.1 (2026-07-20) RE.1.1.9 (2026-07-20) RE.2.4.1 (2026-07-20) PQ.2.5.7 (2026-07-20) TD.1 (2026-07-20) PJ.2 (2026-07-20) PJ.2.1 (2026-07-20) XHC (2026-08-03) SV.4.2 (2026-08-03) SV.4.3 (2026-08-03) SV.1.2.1 (2026-08-03) SV.2.2 (2026-08-03) RF.5.3.1 (2026-08-03) QF.2.6.1 (2026-08-03) TE.1 (2026-08-03) XFZ.4.1 (2026-08-03) PQ.2.4.5 (2026-08-03) TF.1 (2026-08-03) XFG.1.1.8 (2026-08-03) RC.13 (2026-08-03) XFZ.5 (2026-08-17) XFZ.5.1 (2026-08-17) RV.2.1.1 (2026-08-17) RV.1.5 (2026-08-17) XFG.2.5.2 (2026-08-17) RK.1.4 (2026-08-17) RK.1.5 (2026-08-17) RK.1.2.1 (2026-08-17) SV.2.3 (2026-08-17) SV.2.4 (2026-08-17) SV.1.3 (2026-08-17) SV.1.4 (2026-08-17) SV.5 (2026-08-17) RF.5.4.1 (2026-08-17) RF.5.4.2 (2026-08-17) XFZ.6 (2026-08-17) SV.2.5 (2026-08-17) SV.2.6 (2026-08-17) RF.5.3.2 (2026-08-17) TG.1 (2026-08-20) TH.1 (2026-08-20) SB.1.1.1 (2026-08-22) XH

Institutions

Nexen (Canada)University of BaselSwiss School of Public HealthSt. Jude Children's Research HospitalOtherlabEuropean Bioinformatics InstituteUniversité de MontréalETH ZurichFred Hutch Cancer Center
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