Quadrupling the protein family space with global metagenomics

Résumé fourni par la source

Here you can find the data from the study "Quadrupling the protein family space with global metagenomics". For Protein Families: iso_clusters25_names.tsv.bz2 Description: TSV file of isolate clusters with more than 25 members. Columns: (1)Cluster name (2)Representative isolate protein header (3) Isolate protein member header (4)Isolate protein member sequence metag_clusters25_names.tsv.bz2 Description: TSV file of metagenomic clusters with more than 25 members. Columns: (1) Cluster name (2) Representative metagenomic protein header (3) Metagenomic protein member header (4) Metagenomic protein member sequence For Protein Folds structures.tar.gz Description: Contains three subfolders with protein structure models HQ:High-Quality (pTM ≥ 0.7) models (26,767 pdb files) MQ:Medium-Quality (0.5 ≤ pTM < 0.7) models(47,823 pdb files) LQ:Low-Quality (pTM < 0.5) models (82,018 pdb files) foldseek_results.tar.gz Description: You will find three folders (HQ, MQ & LQ). Each one contains three files: AF2.tblout (unfiltered hits to AlphaFoldDB) CATH.tblout (unfiltered hits to CATH) PDB.tblout (unfiltered hits to PDB) NMPFAMSDB2_MODELS_SCORES.txt Description: A txt file with pTM and pLDDT score for each family model. Columns: (1) Family name Column (2) pTm score Column (3)pLDDT score

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.