Additional file 2 of Rumen DNA virome plasticity and viral metabolic potential are associated with seasonal adaptation in grazing yak and cattle on the Qinghai-Tibet Plateau

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Additional file 2: Fig. S1. Viral diversity of yak and cattle across seasons. A Comparison of viral alpha diversity between yak and cattle within each season. B Beta diversity analysis of viral community similarity between yak and cattle. *P < 0.05, **P < 0.01, ***P < 0.001. Fig. S2. Differentially abundant viral families in yak and cattle across cold and warm seasons. Fig. S3. Principal coordinate analysis (PCoA) of virus-encoded KEGG Orthologys (KOs) and CAZyme profiles based on the Bray–Curtis distances. Fig. S4. Top 10 viruses with the highest metabolic gene content. A KO gene counts encoded by the top viruses. B CAZyme gene counts encoded by the top viruses. Top KO-rich viruses belong to the family Peduoviridae, while CAZyme-rich viruses are unclassified Caudoviricetes. Fig. S5. Differentially abundant KEGG pathways between yak and cattle across seasons. Fig. S6. Anti-defense gene profiles in yak and cattle. A Shared and unique anti-defense genes between yak and cattle. B Differentially abundant anti-defense genes between yak and cattle within each season. Venn diagram was generated using Venny 2.1 ( https://bioinfogp.cnb.csic.es/tools/venny/ ).

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