3NdeTECT: triploidy validation and hybrid-ancestry workflow

Le résumé fourni par la source

3NdeTECT v0.2.0 Initial public release of 3NdeTECT. 3NdeTECT is a taxon-agnostic Snakemake workflow for whole-genome sequencing-based triploidy assessment and interspecific ancestry analysis. Main features Allele-frequency-based triploidy assessment Species-diagnostic ancestry dosage estimation Genome-wide window-based ancestry analysis Local ancestry inference Discrete triploid dosage-state analysis D-statistics with block-jackknife resampling Reciprocal-reference mapping assessment Mapping-independent diagnostic k-mer analysis Mitochondrial lineage assessment Integrated QC and reporting The workflow was developed from Crassostrea gigas–C. angulata triploid oyster analyses but is designed to be configurable for other taxa. This software is provided as a research workflow and reproducible implementation of the analytical framework, rather than as a universally validated ploidy-classification tool.

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.