Additional file 1 of Dissecting the genetic basis of yield stability in faba bean by multi-environment analysis

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Additional file 1: Supplementary Figures. Contains Figs. S1–S13. Fig. S1. Variant density. Fig. S2. Density distributions of trait values across environments. Fig. S3. Genetic correlations from a Bayesian reaction norm model with an unknown covariate. Fig. S4. Genetic correlations from a Bayesian reaction norm model with a synthetic covariate. Fig. S5. Genetic variance along the environmental gradient from a Bayesian reaction norm model with an unknown covariate. Fig. S6. Genetic variance along the environmental gradient from a Bayesian reaction norm model with a synthetic covariate. Fig. S7. Effect plots of significant marker-trait associations for trait mean values. Fig. S8. Effect plots of significant marker-trait associations for slopes of a reaction norm model with an unknown covariate. Fig. S9. Effect plots of significant marker-trait associations for slopes of a reaction norm model with a synthetic covariate. Fig. S10. Correlation between posterior means of trait mean and stability. Fig. S11. Haplotype view of genomic regions harboring significant associations. Fig. S12. Protein homology detection via HHpred. Fig. S13. Regression analysis of trait values on candidate gene expression

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