Analysis code for: SLC7A11 expression is associated with prognosis and copy-number-defined malignant hepatocytes in hepatocellular carcinoma: an integrative computational analysis

Le résumé fourni par la source

Analysis code accompanying the manuscript. This version (v2) adds every analysis introduced during revision: multivariable Cox regression with proportional-hazards testing, independent survival replication in ICGC LIRI-JP, inferCNV-based malignancycalling, patient-level (rather than cell-level) single-cell statistics, a control-benchmarked Geneformer in-silico deletion test (negative), GSEA re-run with 2,000 permutations, and Benjamini-Hochberg correction across all 198 compounds. The previous version (2026-07-04) contains only the original pipeline and cannot reproduce the revised manuscript. See README.md for a table mapping every numerical claim in the paper to the script that produces it.

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.