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2026 conference-abstract

Abstract 2257: Eric Medina.

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Abstract Most high-grade serous carcinomas are thought to originate from the fallopian tube epithelium and progress through pre-malignant states that are more susceptible to transformation in BRCA1/2 mutation carriers. However, the early epithelial and stromal programs that arise during transformation remain poorly defined. To address this gap, we analyzed 49 FFPE scRNA-seq samples from 28 patients, including normal ovary and fallopian tube tissues, BRCA1/2 pre-malignant tissues, and matched primary ovarian tumors and metastatic lesions. FASTQ files were aligned to GRCh38 with the Cell Ranger pipeline, followed by doublet removal. Integration was performed using reciprocal principal component analysis separately for normal and pre-malignant ovary or fallopian tube samples, and primary tumor and metastatic samples. Cell type annotation was guided by a custom reference derived from publicly available human fallopian tube scRNA-seq datasets and validated using canonical marker genes. Across samples, we identified major epithelial, immune, and stromal compartments, including distinct secretory and ciliated epithelial populations. Early analyses revealed that malignant epithelial cells from both primary tumor and metastatic lesions overwhelmingly mapped to secretory epithelial lineages, with minimal contribution from ciliated cells. Normal and BRCA1/2 pre-malignant ovary tissues similarly showed a strong enrichment for secretory cells, whereas fallopian tube tissue displayed a more balanced secretory-ciliated distribution. In addition, primary and metastatic samples displayed markedly increased immune infiltration compared with normal and pre-malignant tissues. This comprehensive single-cell dataset provides new insight into early epithelial and microenvironmental changes associated with BRCA1/2 mutation status. Ongoing analyses aim to determine whether specific stromal cell states, such as fibroblast subpopulations, emerge in pre-malignant tissues and persist into malignant and metastatic lesions, suggesting the presence of early tumor-promoting stromal phenotypes. Overall, this study establishes a framework for discovering early microenvironmental drivers of ovarian carcinomas initiation. Citation Format: Eric F. Medina, Jacob I. Rodriguez, Alyssa Bujnak, Devon Lawson, Kai Kessenbrock. Eric Medina [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2026; Part 1 (Regular Abstracts); 2026 Apr 17-22; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2026;86(7 Suppl):Abstract nr 2257.

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Le contrôle bibliographique ouvert

DOI retrouvé dans Crossref DOI retrouvé ; titre concordant.

Titre Crossref
Abstract 2257: Eric Medina.
Date Crossref
03/04/2026
Éditeur
American Association for Cancer Research (AACR)
Type
journal-article

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Où se fait cette recherche

  • University of California pays non établi dans la notice
    Université ou école supérieure
  • University of Chicago pays non établi dans la notice
    Université ou école supérieure
  • Irvine pays non établi dans la notice
    Institution

University of California, University of Chicago et Irvine.

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Les sujets associés

Single-cell and spatial transcriptomicsExtracellular vesicles in diseaseCancer Cells and Metastasis

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