FluoroView: An Open-Source Desktop Application for Interactive Multiplex Fluorescence Microscopy Visualization, Annotation, and Single-Cell Phenotyping

Le résumé fourni par la source

FluoroView v2.0.0 — Multiplex Fluorescence Microscopy Viewer & Analysis Platform A free, open-source Python desktop application for interactive multiplex fluorescence microscopy visualization, annotation, cell segmentation, and single-cell phenotyping. Key features: High-performance tile-cached viewer (69 FPS, up to 50 channels) Interactive ROI tools with publication-quality export Author-tracked annotations with threaded replies Cellpose cell segmentation (5 model presets) Vectorized single-cell quantification (scatter, heatmap, histogram, spatial maps) Threshold-based cell phenotyping with combinatorial marker annotation Multi-file channel merging Session persistence (.fluoroview.npz) Integrated AI assistant (OpenAI, Gemini, Claude) 24 automated tests, pip installable Installation: pip install -r fluoroview/requirements.txt python run_fluoroview.py

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