neuroinformatics-unit/movement: v0.15.0

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To update movement to the latest version, see the update guide. What's Changed ⚡️ Highlight 1: new example for scaling pose tracks to real-world coordinates Add example for scaling pose tracks to real-world coordinates by @HollyMorley in https://github.com/neuroinformatics-unit/movement/pull/827 This new gallery example by @HollyMorley walks through a complete workflow for converting pixel-based pose data to real-world units using a a known reference distance. It demonstrates pre-processing (confidence filtering, interpolation, smoothing), measuring a reference distance in napari, applying movement.transforms.scale(), and computing real-world body measurements and inter-limb distances. Holly is working on a few more examples for our gallery, so keep an eye out for those in the coming releases! ⚡️ Highlight 2: Save and load RoIs via GeoJSON Add ROI save/load functionality via GeoJSON by @niksirbi in https://github.com/neuroinformatics-unit/movement/pull/773 Regions of interest (RoIs) can now be saved to and loaded from GeoJSON files using movement.roi.save_rois() and movement.roi.load_rois(). Each RoI is stored as a GeoJSON Feature containing its geometry and properties (name and RoI type), within a FeatureCollection. This makes it easy to persist ROI definitions across sessions and share them with collaborators. from movement.roi import LineOfInterest, PolygonOfInterest, save_rois, load_rois # Create 2 RoIs: a polygon and a line square = PolygonOfInterest([(0, 0), (1, 0), (1, 1), (0, 1)], name="square") diagonal = LineOfInterest([(0, 0), (1, 1)], name="diagonal") # Save them to a GeoJSON file save_rois([square, diagonal], "rois.geojson") # Load RoIs from a GeoJSON file rois = load_rois("rois.geojson") [roi.name for roi in rois] # returns ["square", "diagonal"] ⚡️ Highlight 3: derive bounding boxes from pose tracks Adds poses_to_bboxes() to movement.transforms to generate 2D bounding by @Edu92337 in https://github.com/neuroinformatics-unit/movement/pull/757 Thanks to @Edu92337, you can now compute bounding boxes from sets of keypoints (poses). The new movement.transforms.poses_to_bboxes() function finds the minimum and maximum coordinates across all keypoints for each individual at each time point. The resulting bounding boxes are represented by their centroid (center point position) and shape (width and height). Suppose poses_ds is a movement poses dataset with a "position" variable containing keypoint coordinates. from movement.transforms import poses_to_bboxes # Compute bounding boxes with zero padding bbox_centroid, bbox_shape = poses_to_bboxes(poses_ds["position"]) # Compute bounding boxes with 10 pixels of padding bbox_centroid, bbox_shape = poses_to_bboxes(poses_ds["position"], padding=10) 🐛 Bug fixes Fix MultiIndex error in compute_forward_displacement (#794) by @Tushar7012 in https://github.com/neuroinformatics-unit/movement/pull/799 📚 Documentation Updated conda installation instructions with pyqt6 by @niksirbi in https://github.com/neuroinformatics-unit/movement/pull/825 Add "See Also" to load_multiview_dataset docstring by @niksirbi in https://github.com/neuroinformatics-unit/movement/pull/824 Remove docstring types and use annotations for docs by @ParthChatupale in https://github.com/neuroinformatics-unit/movement/pull/727 Draft roadmap for 2026 by @niksirbi in https://github.com/neuroinformatics-unit/movement/pull/809 fix: correct loader param name, path assignment, and spelling in docs by @dhruv1955 in https://github.com/neuroinformatics-unit/movement/pull/857 🧹 Housekeeping Remove OSSS announcement banner by @adamltyson in https://github.com/neuroinformatics-unit/movement/pull/828 Make hide_pooch_hash_logs internal by renaming to _hide_pooch_hash_logs by @Shreecharana24 in https://github.com/neuroinformatics-unit/movement/pull/842 Use idiomatic xarray coordinate comparison in test_load_poses by @Kayd-06 in https://github.com/neuroinformatics-unit/movement/pull/876 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/neuroinformatics-unit/movement/pull/861 Contributors-Readme-Action: Update contributors list by @github-actions[bot] in https://github.com/neuroinformatics-unit/movement/pull/856 Bump actions/download-artifact from 7 to 8 by @dependabot[bot] in https://github.com/neuroinformatics-unit/movement/pull/859 Contributors-Readme-Action: Update contributors list by @github-actions[bot] in https://github.com/neuroinformatics-unit/movement/pull/880 New Contributors @HollyMorley made their first contribution in https://github.com/neuroinformatics-unit/movement/pull/827 @Shreecharana24 made their first contribution in https://github.com/neuroinformatics-unit/movement/pull/842 @ParthChatupale made their first contribution in https://github.com/neuroinformatics-unit/movement/pull/727 @dhruv1955 made their first contribution in https://github.com/neuroinformatics-unit/movement/pull/857 @Kayd-06 made their first contribution in https://github.com/neuroinformatics-unit/movement/pull/876 Full Changelog: https://github.com/neuroinformatics-unit/movement/compare/v0.14.0...v0.15.0

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