Segmentation of spinal rootlets across MRI contrasts with RootletSeg

Résumé fourni par la source

Segmentation of spinal nerve rootlets is relevant for spinal level estimation, lesion classification, neuromodulation therapy, and group-level analyses. The aim of this study was to develop a deep learning method for the automatic segmentation of C2-T1 dorsal and ventral spinal nerve rootlets on various MRI scans. The study included MRI scans from two open-access and one private dataset, consisting of 3D isotropic 3T turbo spin echo T2-weighted (T2w) and 7T MP2RAGE (T1-weighted [T1w] INV1 and INV2, and UNIT1) MRI scans. A deep learning model, RootletSeg, was developed on 93 MRI scans from 50 healthy adults (mean age, 28.70 years ± 6.53 [SD]; 28 [56%] males, 22 [44%] females) and achieved a mean ± SD Dice score of 0.67 ± 0.09 for T1w-INV2, 0.65 ± 0.11 for UNIT1, 0.64 ± 0.08 for T2w, and 0.62 ± 0.10 for T1w-INV1 contrasts. RootletSeg accurately segmented C2-T1 spinal rootlets across MRI contrasts, enabling the determination of spinal levels directly from MRI scans. The method is open-source and can be used for a variety of downstream analyses.

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