Additional file 1 of A high-resolution genotype–phenotype map identifies the TaSPL17 controlling grain number and size in wheat

Le résumé fourni par la source

Additional file 1: Table S1. Summary of the 306 worldwide wheat accessions. Table S2. Diversity and genetic structure analyses of the 306 wheat accessions. Table S3. The determination of linkage disequilibrium (r2) in this study. Table S4. The heritability of 27 traits in this study. Table S5. The effects of genotype, environment, genotype ✖ environment interaction and heritability for the 27 traits in this study. Table S6. Overview of the 27 spike morphology traits in this study. Table S7. Detailed information of all significant associated SNPs for the investigated traits (-log10[P value] > 5.00). Table S8. Detailed information of all genomic intervals for the investigated traits. Table S9. The effects of 392 genomic intervals associated with assimilate partitioning for the grain yield traits. Table S10. The expression of candidate genes (FPKM). Table S11. The distance between lead SNPs and TraesCS7A02G246500. Table S12. Targeted mutagenesis of TaSPL17 in different mutant lines. Table S13. The phenotypic data of knock out lines in this study. Table S14. The phenotypic data of overexpression lines in this study. Table S15. Overview of spike morphology traits among the haplotypes of TaSPL17. Table S16. The differences of spike morphology traits among the haplotypes of TaSPL17. Table S17. Worldwide distribution of the three major haplotypes of TaSPL17-A. Table S18. The percentage of worldwide distribution of the three major haplotypes of TaSPL17-A. Table S19. The Hap-A2 information of TaSPL17-A in 306 wheat accession. Table S20. The percentage of the three major haplotypes of TaSPL17-A in different regions. Table S21. The distribution of the twelve major haplotypes of TaSPL17-A in 799 Chinese wheat accessions. Table S22. The percentage of the three major haplotypes of TaSPL17-A in 799 Chinese wheat accessions. Table S23. The linkage disequilibrium (r2) between lead SNPs and haplotype SNPs. Table S24. The identified SNPs of TaSPL17-A by Sanger sequencing. Table S25. The distribution of the four major haplotypes of TaSPL17-B in different areas. Table S26. The distribution of the four major haplotypes of TaSPL17-B in different areas. Table S27. The results of permutation test. Table S28. Primers used in this study.

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.