MOESM8 of Genetic and metabolic signatures of Salmonella enterica subsp. enterica associated with animal sources at the pangenomic scale

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Additional file 8. Microbial GWAS results aiming to associate accessory genes and coregenome variants of Salmonella enterica subsp. enterica serovars (n = 440) with animal sources (i.e. avian bovine, swine and fish). The microbial GWAS was performed with the workflow ‘microbial-GWAS’ based on Linear Mixed Model (LMM) for population structure correction and Wald tests for association. The genome dataset includes both genomes assigned to potential mono- and multi-animal sources based on a curated and synthesized version of Enterobase. The associated mutations (i.e. Wald tests) refer to polygenicity with regard to Quantile-Quantile (QQ) plots from microbial GWAS (i.e. p 5%) and low (i.e.

Ce résumé expose les affirmations des auteurs. BNTIC ne l’interprète pas comme une validation indépendante des résultats.