De novo transcriptome assembly of a lipoxygenase knock-down strain in the diatom Pseudo-nitzschia arenysensis

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We generated knock-down mutants for the LOX gene of the diatom Pseudo-nitzschia arenysensis to alter the synthesis of oxylipins and functionally investigate the mechanism of action of these metabolites in diatoms (as described in Sabatino et al., New Phyt. (2021) doi: 10.1111/NPH.17739). Here, we present the de novo assembly of RNA-seq data obtained both from the silenced and wild-type P. arenysensis strains and the related functional classification of the transcript sequences (Marotta et al., Sci Data. submission #SDATA-23-01949, in revision)

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