Accès ouvert déclaré
2022
preprint
Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science
Deepak Unni, Sierra Moxon, Michael Bada, Matthew Brush, Richard Bruskiewich, J. Harry Caufield, Paul A. Clemons, Vlado Dančík, Michel Dumontier, Karamarie Fecho, Gustavo Glusman, Jennifer Hadlock, Harris Np, Arpita Joshi, Tim Putman, Guangrong Qin, Stephen A. Ramsey, Kent Shefchek, Harold Solbrig, Karthik Soman, Anne Thessen, Melissa A. Haendel, Chris Mungall, Christopher J. Mungall, Liliana Acevedo, Stanley C. Ahalt, John Alden, Ahmed Alkanaq, Nada Amin, Ricardo Ávila, Jim Balhoff, Sergio E. Baranzini, Andrew Baumgartner, William Baumgartner, Basazin Belhu, MacKenzie Brandes, Namdi Brandon, NOËL BURTT, William Byrd, Jackson Callaghan, Marco Alvarado Cano, Steven Carrell, Remzi Celebi, James Champion, Zhehuan Chen, Mei-Jan Chen, Lawrence Chung, Kevin Cohen, Tom Conlin, Dan Corkill, Maria Costanzo, Steven Cox, Andrew Crouse, Camerron Crowder, Mary E. Crumbley, Cheng Dai, Ricardo De Miranda Azevedo, Éric Deutsch, Jennifer Dougherty, Marc Duby, Venkata Duvvuri, Stephen Edwards, Vincent Emonet, Nathaniel Fehrmann, Jason Flannick, Aleksandra M. Foksinska, Vicki Gardner, Edgar Gatica, Amy Glen, Prateek Goel, Joseph Gormley, Alon Greyber, Perry Haaland, Kristina Hanspers, Kaiwen He, Jeff Henrickson, Eugene W. Hinderer, Maureen Hoatlin, Andrew Hoffman, Sui Huang, Chun‐Yao Huang, Robert Hubal, Kenneth Huellas‐Bruskiewicz, Forest B. Huls, LE Hunter, Greg Hyde, Tursynay Issabekova, Matthew Jarrell, Lindsay Jenkins, Adam Johs, Jimin Kang, Richa Kanwar, Yaphet Kebede, Keum Joo Kim, Alexandria Kluge, Michael Knowles, Ryan Koesterer, Daniel Korn, David Koslicki, Ashok Krishnamurthy, Lindsey Kvarfordt, Jay Lee, Margaret Leigh, Jason Lin, Zheng Liu, Shaopeng Liu, C W, Andrew Magis, Tarun Mamidi, Meisha Mandal, Michelle Mantilla, Jeffrey Massung, Denise Mauldin, Jason McClelland, McMurry Julie, Philip Mease, Luis Mendoza, Marian Mersmann, Abrar Mesbah, Matthew Might, Kenny Morton, Sandrine Muller, Arun Teja Muluka, J S Osborne, P Owen, Michael Patton, David B. Peden, R. Carter Peene, Bria Persaud, Emily Pfaff, Alexander Pico, Elizabeth Pollard, Guthrie Price, Shruti Raj, Jason Reilly, Anders Riutta, Jared Roach, Ryan Roper, Greg Rosenblatt, Irit Rubin, Sienna Rucka, Nathaniel Rudavsky‐Brody, Rayn Sakaguchi, Eugene Santos, Kevin Schaper, Charles Schmitt, Shepherd Schurman, E. Kilburn Scott, Sarah Seitanakis, Priya Sharma, Ilya Shmulevich, M Shrestha, Shalki Shrivastava, Meghamala Sinha, Brett Smith, Noel Southall, Nicholas Southern, Lisa Stillwell, Michael " Michi" Strasser, Andrew I. Su, Casey Ta, Jillian Tinglin, Lucas Tonstad, Thi Tran‐Nguyen, Alexander Tropsha, Gaurav Vaidya, Luke Veenhuis, Adam Viola, Marcin Grotthuss, Max Wang, Patrick Wang, Paul B. Watkins, Rosina Weber, Qi Wei, Chunhua Weng, Jordan Whitlock, Mark D. Williams, Andrew Williams, Finn Womack, Erica Wood, Chunlei Wu, Jiwen Kevin Xin, Hao Xu, C Xu, Chase Yakaboski, Yao Yao, Hong Yi, Arif Yılmaz, Marissa Zheng, Xinghua Zhou, Eric Zhou, Zhu Qf, Tom Zisk
7Citations signalées, ce qui n’est pas une note de qualité
11Institutions déclarées
3Pays d’affiliation déclarés
Rattachement africain : us, de, nl.
Niveau de preuve : code pays fourni par la source.
Le résumé fourni par la source
What's Changed Add model-organism anatomy prefixes to GrossAnatomicalStructure by @kevinschaper in https://github.com/biolink/biolink-model/pull/1747 Add DiseaseToDiseaseAssociation class by @mellybelly in https://github.com/biolink/biolink-model/pull/1745 Allow NCIT identifiers for biolink:Protein by @sierra-moxon with @Copilot in https://github.com/biolink/biolink-model/pull/1749 add sensitivity and response associations by @sierra-moxon in https://github.com/biolink/biolink-model/pull/1754 Fix 'sensitivity increased by' parent by @mbrush in https://github.com/biolink/biolink-model/pull/1751 updated condition prevented by predicate name and parent by @mbrush in https://github.com/biolink/biolink-model/pull/1752 add cooldown and malware check on imports by @sierra-moxon in https://github.com/biolink/biolink-model/pull/1755 Bump the github-actions group with 9 updates by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1756 Bump curies from 0.13.3 to 0.13.13 in the patch-updates group across 1 directory by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1757 Bump pytest from 9.0.3 to 9.1.1 by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1759 Bump schemasheets from 0.2.1 to 0.4.0 by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1760 Bump beautifulsoup4 from 4.14.3 to 4.15.0 by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1761 Bump requests from 2.33.1 to 2.34.2 by @dependabot[bot] in https://github.com/biolink/biolink-model/pull/1762 prep for a release by @sierra-moxon in https://github.com/biolink/biolink-model/pull/1763 New Contributors @mellybelly made their first contribution in https://github.com/biolink/biolink-model/pull/1745 Full Changelog: https://github.com/biolink/biolink-model/compare/v4.4.2...v4.4.3
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Les sujets associés
Biomedical Text Mining and OntologiesBioinformatics and Genomic NetworksGenetics, Bioinformatics, and Biomedical Research