Paenibacillus typhae sp. nov., isolated from roots of Typha angustifolia L.

Le résumé fourni par la source

A Gram-stain-positive, facultatively anaerobic and rod-shaped bacterium, designated strain xj7(T), was isolated from roots of Typha angustifolia L. growing in Beijing Cuihu Wetland, China. The isolate was identified as a member of the genus Paenibacillus based on phenotypic characteristics and phylogenetic inference. The novel strain was spore-forming, motile, catalase-positive and oxidase-negative. Optimal growth of strain xj7(T) occurred at 28-30 °C and pH 7.0-7.5. Diphosphatidylglycerol was the most abundant polar lipid and occurred along with phosphatidylglycerol, phosphatidylethanolamine, one unknown phospholipid and three unknown aminophospholipids. The diamino acid found in the cell-wall peptidoglycan was meso-diaminopimelic acid. The predominant isoprenoid quinone was MK-7. The major fatty acid components were anteiso-C15 : 0 (56.1 %), iso-C16 : 0 (9.1 %), C16 : 0 (8.0 %), iso-C14 : 0 (6.3 %) and iso-C15 : 0 (5.1 %). The G+C content of genomic DNA was 47.9 mol%. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain xj7(T) fell within the evolutionary radiation encompassed by the genus Paenibacillus, its closest neighbours were Paenibacillus borealis KK19(T) (97.5 %) and Paenibacillus durus DSM 1735(T) (97.1 %). However, the DNA-DNA relatedness values between strain xj7(T) and P. borealis KK19(T) and between strain xj7(T) and P. durus DSM 1735(T), were both 35 %. Based on phenotypic, chemotaxonomic and phylogenetic properties, strain xj7(T) is considered to represent a novel species of the genus Paenibacillus, for which the name Paenibacillus typhae sp. nov. is proposed. The type strain is xj7(T) ( = CGMCC 1.11012(T) = DSM 25190(T)).

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