refMLST: Reference-based Multilocus Sequence Typing Enables Universal Bacterial Typing
Mondher Khdhiri, Ella Thomas, Chanel De Smet, Priyanka Chandar et autres
Abstract Summary Commonly used approaches for genomic investigation of bacterial outbreaks, including SNP and gene-by-gene approaches, are limited by the requirement for curated allele schemes. As a result, they only work on a select subset of known organisms, and fail on novel …
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bioRxiv (Cold Spring Harbor Laboratory)