Stefania Giacomello

Norway spruce spatiotemporal programs of conifer reproductive development

Sami Saarenpää, Nathan Zivi, Yuvarani Masarapu, Laxmi Mishra et autres

Conifers are essential components of forest ecosystems; however, their reproductive development remains largely understudied due to their genomes' complexity. Here, we present a time-resolved spatial transcriptomics (ST) atlas of 88 tissue sections across three time points from developing reproductive and vegetative shoots …

se (code pays fourni par la source)

Building AI-Ready Data Systems for Space Life Sciences, Aerospace Medicine, and Deep Space Exploration

Sylvain V. Costes, Sergio Garcia Busto, Ryan T. Scott, James Casaletto et autres

While AI holds the potential to revolutionize space life sciences, realizing this promise is contingent upon the systematic restructuring of heterogeneous spaceflight biological data into machine-actionable, AI-ready forms. Even though open access principles support human reuse and scientific reproducibility, this does not …

Building AI-Ready Data Systems for Space Life Sciences, Aerospace Medicine, and Deep Space Exploration

Sylvain V. Costes, Sergio Garcia Busto, Ryan T. Scott, James Casaletto et autres

While AI holds the potential to revolutionize space life sciences, realizing this promise is contingent upon the systematic restructuring of heterogeneous spaceflight biological data into machine-actionable, AI-ready forms. Even though open access principles support human reuse and scientific reproducibility, this does not …

us, fr, nl, it, se, gb (code pays fourni par la source)

ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Probe-based Spatial Transcriptomics profiles spatially-resolved transcriptomes using gene-specific probe pairs for both Formalin-fixed paraffin-embedded (FFPE) and Fresh Frozen samples. However, its applicability is restricted to human and mouse studies, due to commercial probe set availability. Here, we present ProbeST, an open-source computational …

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Additional file 3 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 3.

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Additional file 9 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 9.

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Additional file 14 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 14.

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Additional file 5 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 5.

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Additional file 12 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 12.

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Additional file 6 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 6.

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Additional file 1 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 1.

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Additional file 2 of ProbeST: a custom probe design pipeline for dual host–pathogen Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard et autres

Supplementary Material 2.

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